Protein–RNA interactions for Protein: Q96CX6

LRRC58, Leucine-rich repeat-containing protein 58, humanhuman

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC58Q96CX6 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LRRC58Q96CX6 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LRRC58Q96CX6 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LRRC58Q96CX6 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
LRRC58Q96CX6 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LRRC58Q96CX6 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC16.16■□□□□ 0.18
LRRC58Q96CX6 HYMAI-201ENST00000635591 3347 ntBASIC16.16■□□□□ 0.18
LRRC58Q96CX6 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC16.15■□□□□ 0.18
LRRC58Q96CX6 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRRC58Q96CX6 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRRC58Q96CX6 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRRC58Q96CX6 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRRC58Q96CX6 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRRC58Q96CX6 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC16.15■□□□□ 0.18
LRRC58Q96CX6 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRRC58Q96CX6 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRRC58Q96CX6 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LRRC58Q96CX6 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LRRC58Q96CX6 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRRC58Q96CX6 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRRC58Q96CX6 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
LRRC58Q96CX6 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRRC58Q96CX6 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRRC58Q96CX6 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRRC58Q96CX6 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRRC58Q96CX6 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRRC58Q96CX6 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRRC58Q96CX6 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRRC58Q96CX6 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRRC58Q96CX6 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC16.15■□□□□ 0.18
LRRC58Q96CX6 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LRRC58Q96CX6 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC16.15■□□□□ 0.18
LRRC58Q96CX6 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LRRC58Q96CX6 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC16.15■□□□□ 0.18
LRRC58Q96CX6 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LRRC58Q96CX6 PC-204ENST00000524491 1714 ntTSL 2 BASIC16.15■□□□□ 0.18
LRRC58Q96CX6 BLK-205ENST00000529894 2017 ntTSL 5 BASIC16.15■□□□□ 0.18
LRRC58Q96CX6 AC009533.2-201ENST00000543664 586 ntBASIC16.15■□□□□ 0.18
LRRC58Q96CX6 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC16.15■□□□□ 0.18
LRRC58Q96CX6 AC012306.2-201ENST00000609350 630 ntBASIC16.15■□□□□ 0.18
LRRC58Q96CX6 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
LRRC58Q96CX6 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC16.15■□□□□ 0.18
LRRC58Q96CX6 AC097493.4-201ENST00000641197 219 ntBASIC16.15■□□□□ 0.18
LRRC58Q96CX6 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRRC58Q96CX6 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRRC58Q96CX6 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC16.15■□□□□ 0.18
LRRC58Q96CX6 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
LRRC58Q96CX6 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRRC58Q96CX6 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LRRC58Q96CX6 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LRRC58Q96CX6 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC16.15■□□□□ 0.18
LRRC58Q96CX6 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
LRRC58Q96CX6 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRRC58Q96CX6 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRRC58Q96CX6 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRRC58Q96CX6 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRRC58Q96CX6 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRRC58Q96CX6 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LRRC58Q96CX6 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRRC58Q96CX6 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LRRC58Q96CX6 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC16.14■□□□□ 0.17
LRRC58Q96CX6 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LRRC58Q96CX6 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRRC58Q96CX6 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LRRC58Q96CX6 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC16.14■□□□□ 0.17
LRRC58Q96CX6 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LRRC58Q96CX6 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRRC58Q96CX6 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRRC58Q96CX6 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
LRRC58Q96CX6 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC16.14■□□□□ 0.17
LRRC58Q96CX6 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
LRRC58Q96CX6 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC16.14■□□□□ 0.17
LRRC58Q96CX6 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRRC58Q96CX6 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRRC58Q96CX6 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRRC58Q96CX6 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LRRC58Q96CX6 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRRC58Q96CX6 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
LRRC58Q96CX6 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
LRRC58Q96CX6 DANCR-204ENST00000444958 709 ntTSL 3 BASIC16.14■□□□□ 0.17
LRRC58Q96CX6 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LRRC58Q96CX6 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LRRC58Q96CX6 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRRC58Q96CX6 AC090616.6-201ENST00000582640 721 ntBASIC16.14■□□□□ 0.17
LRRC58Q96CX6 IGHV3-41-201ENST00000613121 348 ntBASIC16.14■□□□□ 0.17
LRRC58Q96CX6 AC083849.1-201ENST00000615227 514 ntBASIC16.14■□□□□ 0.17
LRRC58Q96CX6 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
LRRC58Q96CX6 AC073592.5-201ENST00000624854 528 ntBASIC16.14■□□□□ 0.17
LRRC58Q96CX6 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRRC58Q96CX6 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRRC58Q96CX6 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
LRRC58Q96CX6 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC16.14■□□□□ 0.17
LRRC58Q96CX6 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRRC58Q96CX6 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRRC58Q96CX6 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
LRRC58Q96CX6 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRRC58Q96CX6 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC16.14■□□□□ 0.17
LRRC58Q96CX6 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRRC58Q96CX6 MYB-242ENST00000618728 3545 ntTSL 5 BASIC16.14■□□□□ 0.17
LRRC58Q96CX6 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms