Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RTN4IP1Q8WWV3 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC14.32□□□□□ -0.12
RTN4IP1Q8WWV3 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RTN4IP1Q8WWV3 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RTN4IP1Q8WWV3 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
RTN4IP1Q8WWV3 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
RTN4IP1Q8WWV3 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
RTN4IP1Q8WWV3 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RTN4IP1Q8WWV3 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RTN4IP1Q8WWV3 TOB2P1-201ENST00000469761 992 ntBASIC14.32□□□□□ -0.12
RTN4IP1Q8WWV3 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC14.32□□□□□ -0.12
RTN4IP1Q8WWV3 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC14.32□□□□□ -0.12
RTN4IP1Q8WWV3 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC14.32□□□□□ -0.12
RTN4IP1Q8WWV3 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC14.32□□□□□ -0.12
RTN4IP1Q8WWV3 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC14.32□□□□□ -0.12
RTN4IP1Q8WWV3 AC011270.2-201ENST00000624293 2550 ntBASIC14.32□□□□□ -0.12
RTN4IP1Q8WWV3 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
RTN4IP1Q8WWV3 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
RTN4IP1Q8WWV3 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
RTN4IP1Q8WWV3 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
RTN4IP1Q8WWV3 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
RTN4IP1Q8WWV3 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RTN4IP1Q8WWV3 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC14.32□□□□□ -0.12
RTN4IP1Q8WWV3 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC14.32□□□□□ -0.12
RTN4IP1Q8WWV3 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RTN4IP1Q8WWV3 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC14.32□□□□□ -0.12
RTN4IP1Q8WWV3 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RTN4IP1Q8WWV3 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC14.32□□□□□ -0.12
RTN4IP1Q8WWV3 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC14.32□□□□□ -0.12
RTN4IP1Q8WWV3 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC14.31□□□□□ -0.12
RTN4IP1Q8WWV3 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
RTN4IP1Q8WWV3 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RTN4IP1Q8WWV3 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC14.31□□□□□ -0.12
RTN4IP1Q8WWV3 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RTN4IP1Q8WWV3 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RTN4IP1Q8WWV3 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RTN4IP1Q8WWV3 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RTN4IP1Q8WWV3 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RTN4IP1Q8WWV3 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RTN4IP1Q8WWV3 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC14.31□□□□□ -0.12
RTN4IP1Q8WWV3 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RTN4IP1Q8WWV3 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RTN4IP1Q8WWV3 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RTN4IP1Q8WWV3 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC14.31□□□□□ -0.12
RTN4IP1Q8WWV3 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC14.31□□□□□ -0.12
RTN4IP1Q8WWV3 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
RTN4IP1Q8WWV3 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC14.31□□□□□ -0.12
RTN4IP1Q8WWV3 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
RTN4IP1Q8WWV3 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
RTN4IP1Q8WWV3 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
RTN4IP1Q8WWV3 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
RTN4IP1Q8WWV3 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
RTN4IP1Q8WWV3 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC14.31□□□□□ -0.12
RTN4IP1Q8WWV3 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RTN4IP1Q8WWV3 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RTN4IP1Q8WWV3 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RTN4IP1Q8WWV3 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RTN4IP1Q8WWV3 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RTN4IP1Q8WWV3 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
RTN4IP1Q8WWV3 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC14.31□□□□□ -0.12
RTN4IP1Q8WWV3 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC14.31□□□□□ -0.12
RTN4IP1Q8WWV3 LINC00265-3P-201ENST00000447588 903 ntBASIC14.31□□□□□ -0.12
RTN4IP1Q8WWV3 PON3-205ENST00000451904 1053 ntTSL 3 BASIC14.31□□□□□ -0.12
RTN4IP1Q8WWV3 AC091607.1-201ENST00000490318 1060 ntBASIC14.31□□□□□ -0.12
RTN4IP1Q8WWV3 IGHV3-52-201ENST00000519770 353 ntBASIC14.31□□□□□ -0.12
RTN4IP1Q8WWV3 AC009533.2-201ENST00000543664 586 ntBASIC14.31□□□□□ -0.12
RTN4IP1Q8WWV3 AP005901.3-202ENST00000581653 237 ntBASIC14.31□□□□□ -0.12
RTN4IP1Q8WWV3 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC14.31□□□□□ -0.12
RTN4IP1Q8WWV3 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RTN4IP1Q8WWV3 TSPY26P-202ENST00000565928 3884 ntBASIC14.31□□□□□ -0.12
RTN4IP1Q8WWV3 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RTN4IP1Q8WWV3 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC14.31□□□□□ -0.12
RTN4IP1Q8WWV3 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC14.31□□□□□ -0.12
RTN4IP1Q8WWV3 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RTN4IP1Q8WWV3 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RTN4IP1Q8WWV3 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RTN4IP1Q8WWV3 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC14.31□□□□□ -0.12
RTN4IP1Q8WWV3 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC14.31□□□□□ -0.12
RTN4IP1Q8WWV3 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RTN4IP1Q8WWV3 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC14.31□□□□□ -0.12
RTN4IP1Q8WWV3 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RTN4IP1Q8WWV3 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
RTN4IP1Q8WWV3 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
RTN4IP1Q8WWV3 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RTN4IP1Q8WWV3 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
RTN4IP1Q8WWV3 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC14.31□□□□□ -0.12
RTN4IP1Q8WWV3 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC14.31□□□□□ -0.12
RTN4IP1Q8WWV3 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RTN4IP1Q8WWV3 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
RTN4IP1Q8WWV3 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RTN4IP1Q8WWV3 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
RTN4IP1Q8WWV3 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RTN4IP1Q8WWV3 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RTN4IP1Q8WWV3 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RTN4IP1Q8WWV3 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC14.3□□□□□ -0.12
RTN4IP1Q8WWV3 PGR-209ENST00000617858 2816 ntTSL 5 BASIC14.3□□□□□ -0.12
RTN4IP1Q8WWV3 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RTN4IP1Q8WWV3 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC14.3□□□□□ -0.12
RTN4IP1Q8WWV3 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
RTN4IP1Q8WWV3 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms