Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC14.09□□□□□ -0.15
ZNF439Q8NDP4 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
ZNF439Q8NDP4 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
ZNF439Q8NDP4 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
ZNF439Q8NDP4 NKILA-202ENST00000614771 2598 ntBASIC14.09□□□□□ -0.15
ZNF439Q8NDP4 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC14.09□□□□□ -0.15
ZNF439Q8NDP4 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC14.09□□□□□ -0.15
ZNF439Q8NDP4 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ZNF439Q8NDP4 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
ZNF439Q8NDP4 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC14.09□□□□□ -0.15
ZNF439Q8NDP4 S100A2-206ENST00000497140 697 ntTSL 2 BASIC14.09□□□□□ -0.15
ZNF439Q8NDP4 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
ZNF439Q8NDP4 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC14.09□□□□□ -0.15
ZNF439Q8NDP4 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC14.09□□□□□ -0.15
ZNF439Q8NDP4 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
ZNF439Q8NDP4 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC14.09□□□□□ -0.15
ZNF439Q8NDP4 CYB561-217ENST00000582997 877 ntTSL 5 BASIC14.09□□□□□ -0.15
ZNF439Q8NDP4 COPE-211ENST00000600932 1144 ntTSL 5 BASIC14.09□□□□□ -0.15
ZNF439Q8NDP4 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ZNF439Q8NDP4 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC14.09□□□□□ -0.15
ZNF439Q8NDP4 AL732292.2-201ENST00000609649 430 ntBASIC14.09□□□□□ -0.15
ZNF439Q8NDP4 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC14.09□□□□□ -0.15
ZNF439Q8NDP4 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC14.09□□□□□ -0.15
ZNF439Q8NDP4 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ZNF439Q8NDP4 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC14.09□□□□□ -0.15
ZNF439Q8NDP4 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
ZNF439Q8NDP4 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ZNF439Q8NDP4 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ZNF439Q8NDP4 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC14.09□□□□□ -0.15
ZNF439Q8NDP4 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
ZNF439Q8NDP4 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ZNF439Q8NDP4 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
ZNF439Q8NDP4 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
ZNF439Q8NDP4 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
ZNF439Q8NDP4 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ZNF439Q8NDP4 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ZNF439Q8NDP4 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC14.09□□□□□ -0.15
ZNF439Q8NDP4 AC105020.1-201ENST00000435356 2205 ntBASIC14.09□□□□□ -0.15
ZNF439Q8NDP4 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
ZNF439Q8NDP4 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
ZNF439Q8NDP4 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.15
ZNF439Q8NDP4 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
ZNF439Q8NDP4 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
ZNF439Q8NDP4 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ZNF439Q8NDP4 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
ZNF439Q8NDP4 AC046158.3-201ENST00000624947 2558 ntBASIC14.08□□□□□ -0.16
ZNF439Q8NDP4 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
ZNF439Q8NDP4 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
ZNF439Q8NDP4 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
ZNF439Q8NDP4 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ZNF439Q8NDP4 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC14.08□□□□□ -0.16
ZNF439Q8NDP4 LSM5-204ENST00000409909 740 ntTSL 2 BASIC14.08□□□□□ -0.16
ZNF439Q8NDP4 RBM17P3-201ENST00000417687 1192 ntBASIC14.08□□□□□ -0.16
ZNF439Q8NDP4 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC14.08□□□□□ -0.16
ZNF439Q8NDP4 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC14.08□□□□□ -0.16
ZNF439Q8NDP4 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
ZNF439Q8NDP4 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC14.08□□□□□ -0.16
ZNF439Q8NDP4 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC14.08□□□□□ -0.16
ZNF439Q8NDP4 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC14.08□□□□□ -0.16
ZNF439Q8NDP4 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC14.08□□□□□ -0.16
ZNF439Q8NDP4 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC14.08□□□□□ -0.16
ZNF439Q8NDP4 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ZNF439Q8NDP4 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
ZNF439Q8NDP4 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC14.08□□□□□ -0.16
ZNF439Q8NDP4 AC097637.2-201ENST00000624096 1997 ntBASIC14.08□□□□□ -0.16
ZNF439Q8NDP4 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
ZNF439Q8NDP4 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
ZNF439Q8NDP4 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
ZNF439Q8NDP4 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ZNF439Q8NDP4 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
ZNF439Q8NDP4 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
ZNF439Q8NDP4 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ZNF439Q8NDP4 GID4-202ENST00000376345 1391 ntTSL 3 BASIC14.08□□□□□ -0.16
ZNF439Q8NDP4 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
ZNF439Q8NDP4 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
ZNF439Q8NDP4 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
ZNF439Q8NDP4 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ZNF439Q8NDP4 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ZNF439Q8NDP4 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC14.07□□□□□ -0.16
ZNF439Q8NDP4 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
ZNF439Q8NDP4 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ZNF439Q8NDP4 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
ZNF439Q8NDP4 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ZNF439Q8NDP4 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC14.07□□□□□ -0.16
ZNF439Q8NDP4 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC14.07□□□□□ -0.16
ZNF439Q8NDP4 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ZNF439Q8NDP4 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
ZNF439Q8NDP4 AC005915.1-201ENST00000624912 2018 ntBASIC14.07□□□□□ -0.16
ZNF439Q8NDP4 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
ZNF439Q8NDP4 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
ZNF439Q8NDP4 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ZNF439Q8NDP4 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC14.07□□□□□ -0.16
ZNF439Q8NDP4 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
ZNF439Q8NDP4 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ZNF439Q8NDP4 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ZNF439Q8NDP4 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ZNF439Q8NDP4 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
ZNF439Q8NDP4 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ZNF439Q8NDP4 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
ZNF439Q8NDP4 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms