Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
FOXR1Q6PIV2 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
FOXR1Q6PIV2 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC17.74■□□□□ 0.43
FOXR1Q6PIV2 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
FOXR1Q6PIV2 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
FOXR1Q6PIV2 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC17.74■□□□□ 0.43
FOXR1Q6PIV2 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC17.74■□□□□ 0.43
FOXR1Q6PIV2 ELP6-205ENST00000439305 880 ntTSL 2 BASIC17.74■□□□□ 0.43
FOXR1Q6PIV2 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC17.74■□□□□ 0.43
FOXR1Q6PIV2 AL160237.2-201ENST00000556165 472 ntBASIC17.74■□□□□ 0.43
FOXR1Q6PIV2 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
FOXR1Q6PIV2 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC17.74■□□□□ 0.43
FOXR1Q6PIV2 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
FOXR1Q6PIV2 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
FOXR1Q6PIV2 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
FOXR1Q6PIV2 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC17.74■□□□□ 0.43
FOXR1Q6PIV2 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
FOXR1Q6PIV2 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC17.74■□□□□ 0.43
FOXR1Q6PIV2 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
FOXR1Q6PIV2 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.74■□□□□ 0.43
FOXR1Q6PIV2 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
FOXR1Q6PIV2 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
FOXR1Q6PIV2 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC17.74■□□□□ 0.43
FOXR1Q6PIV2 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
FOXR1Q6PIV2 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
FOXR1Q6PIV2 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
FOXR1Q6PIV2 CROCCP1-201ENST00000426910 5675 ntBASIC17.73■□□□□ 0.43
FOXR1Q6PIV2 AC099063.4-201ENST00000641099 1602 ntBASIC17.73■□□□□ 0.43
FOXR1Q6PIV2 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
FOXR1Q6PIV2 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
FOXR1Q6PIV2 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
FOXR1Q6PIV2 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
FOXR1Q6PIV2 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
FOXR1Q6PIV2 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
FOXR1Q6PIV2 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
FOXR1Q6PIV2 BAALC-202ENST00000306391 243 ntTSL 5 BASIC17.73■□□□□ 0.43
FOXR1Q6PIV2 BAALC-204ENST00000330955 222 ntTSL 5 BASIC17.73■□□□□ 0.43
FOXR1Q6PIV2 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
FOXR1Q6PIV2 DFFB-203ENST00000341385 572 ntTSL 5 BASIC17.73■□□□□ 0.43
FOXR1Q6PIV2 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
FOXR1Q6PIV2 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC17.73■□□□□ 0.43
FOXR1Q6PIV2 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC17.73■□□□□ 0.43
FOXR1Q6PIV2 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
FOXR1Q6PIV2 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC17.73■□□□□ 0.43
FOXR1Q6PIV2 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
FOXR1Q6PIV2 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
FOXR1Q6PIV2 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
FOXR1Q6PIV2 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC17.73■□□□□ 0.43
FOXR1Q6PIV2 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
FOXR1Q6PIV2 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
FOXR1Q6PIV2 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC17.73■□□□□ 0.43
FOXR1Q6PIV2 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
FOXR1Q6PIV2 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC17.73■□□□□ 0.43
FOXR1Q6PIV2 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
FOXR1Q6PIV2 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
FOXR1Q6PIV2 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
FOXR1Q6PIV2 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
FOXR1Q6PIV2 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC17.72■□□□□ 0.43
FOXR1Q6PIV2 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
FOXR1Q6PIV2 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
FOXR1Q6PIV2 REXO1L11P-201ENST00000620964 1927 ntBASIC17.72■□□□□ 0.43
FOXR1Q6PIV2 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
FOXR1Q6PIV2 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC17.72■□□□□ 0.43
FOXR1Q6PIV2 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
FOXR1Q6PIV2 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC17.72■□□□□ 0.43
FOXR1Q6PIV2 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC17.72■□□□□ 0.43
FOXR1Q6PIV2 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
FOXR1Q6PIV2 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
FOXR1Q6PIV2 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC17.72■□□□□ 0.43
FOXR1Q6PIV2 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
FOXR1Q6PIV2 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
FOXR1Q6PIV2 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
FOXR1Q6PIV2 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
FOXR1Q6PIV2 VILL-207ENST00000465644 1857 ntTSL 5 BASIC17.72■□□□□ 0.43
FOXR1Q6PIV2 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC17.72■□□□□ 0.43
FOXR1Q6PIV2 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
FOXR1Q6PIV2 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
FOXR1Q6PIV2 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC17.72■□□□□ 0.43
FOXR1Q6PIV2 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC17.72■□□□□ 0.43
FOXR1Q6PIV2 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
FOXR1Q6PIV2 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC17.72■□□□□ 0.43
FOXR1Q6PIV2 AC104390.1-201ENST00000555663 520 ntBASIC17.72■□□□□ 0.43
FOXR1Q6PIV2 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC17.72■□□□□ 0.43
FOXR1Q6PIV2 AC090616.6-201ENST00000582640 721 ntBASIC17.72■□□□□ 0.43
FOXR1Q6PIV2 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC17.72■□□□□ 0.43
FOXR1Q6PIV2 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
FOXR1Q6PIV2 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
FOXR1Q6PIV2 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC17.72■□□□□ 0.43
FOXR1Q6PIV2 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
FOXR1Q6PIV2 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
FOXR1Q6PIV2 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC17.72■□□□□ 0.43
FOXR1Q6PIV2 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
FOXR1Q6PIV2 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC17.72■□□□□ 0.43
FOXR1Q6PIV2 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
FOXR1Q6PIV2 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
FOXR1Q6PIV2 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
FOXR1Q6PIV2 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
FOXR1Q6PIV2 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC17.72■□□□□ 0.43
FOXR1Q6PIV2 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
FOXR1Q6PIV2 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms