Protein–RNA interactions for Protein: Q6ICC9

RTL6, Retrotransposon Gag-like protein 6, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL6Q6ICC9 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
RTL6Q6ICC9 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
RTL6Q6ICC9 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
RTL6Q6ICC9 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RTL6Q6ICC9 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RTL6Q6ICC9 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RTL6Q6ICC9 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RTL6Q6ICC9 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
RTL6Q6ICC9 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RTL6Q6ICC9 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
RTL6Q6ICC9 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RTL6Q6ICC9 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
RTL6Q6ICC9 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RTL6Q6ICC9 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
RTL6Q6ICC9 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC15.3■□□□□ 0.04
RTL6Q6ICC9 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
RTL6Q6ICC9 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC15.3■□□□□ 0.04
RTL6Q6ICC9 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
RTL6Q6ICC9 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
RTL6Q6ICC9 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
RTL6Q6ICC9 PUS1-205ENST00000535067 838 ntTSL 3 BASIC15.3■□□□□ 0.04
RTL6Q6ICC9 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC15.3■□□□□ 0.04
RTL6Q6ICC9 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC15.3■□□□□ 0.04
RTL6Q6ICC9 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC15.3■□□□□ 0.04
RTL6Q6ICC9 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC15.3■□□□□ 0.04
RTL6Q6ICC9 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
RTL6Q6ICC9 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
RTL6Q6ICC9 RPS15-207ENST00000591032 550 ntTSL 3 BASIC15.3■□□□□ 0.04
RTL6Q6ICC9 AC012313.1-201ENST00000593393 3059 ntBASIC15.3■□□□□ 0.04
RTL6Q6ICC9 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC15.3■□□□□ 0.04
RTL6Q6ICC9 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC15.3■□□□□ 0.04
RTL6Q6ICC9 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC15.3■□□□□ 0.04
RTL6Q6ICC9 AC141586.5-201ENST00000624546 2050 ntBASIC15.3■□□□□ 0.04
RTL6Q6ICC9 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
RTL6Q6ICC9 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RTL6Q6ICC9 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RTL6Q6ICC9 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC15.3■□□□□ 0.04
RTL6Q6ICC9 AC009053.2-201ENST00000563701 2365 ntBASIC15.29■□□□□ 0.04
RTL6Q6ICC9 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC15.29■□□□□ 0.04
RTL6Q6ICC9 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
RTL6Q6ICC9 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC15.29■□□□□ 0.04
RTL6Q6ICC9 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RTL6Q6ICC9 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
RTL6Q6ICC9 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RTL6Q6ICC9 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC15.29■□□□□ 0.04
RTL6Q6ICC9 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
RTL6Q6ICC9 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC15.29■□□□□ 0.04
RTL6Q6ICC9 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RTL6Q6ICC9 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RTL6Q6ICC9 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
RTL6Q6ICC9 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RTL6Q6ICC9 REM2-202ENST00000536884 1331 ntTSL 2 BASIC15.29■□□□□ 0.04
RTL6Q6ICC9 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RTL6Q6ICC9 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC15.29■□□□□ 0.04
RTL6Q6ICC9 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
RTL6Q6ICC9 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC15.29■□□□□ 0.04
RTL6Q6ICC9 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC15.29■□□□□ 0.04
RTL6Q6ICC9 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RTL6Q6ICC9 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
RTL6Q6ICC9 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
RTL6Q6ICC9 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RTL6Q6ICC9 AC091812.2-201ENST00000619081 385 ntBASIC15.29■□□□□ 0.04
RTL6Q6ICC9 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC15.29■□□□□ 0.04
RTL6Q6ICC9 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
RTL6Q6ICC9 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RTL6Q6ICC9 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RTL6Q6ICC9 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
RTL6Q6ICC9 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RTL6Q6ICC9 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
RTL6Q6ICC9 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
RTL6Q6ICC9 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC15.29■□□□□ 0.04
RTL6Q6ICC9 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
RTL6Q6ICC9 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC15.29■□□□□ 0.04
RTL6Q6ICC9 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC15.29■□□□□ 0.04
RTL6Q6ICC9 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RTL6Q6ICC9 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC15.28■□□□□ 0.04
RTL6Q6ICC9 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC15.28■□□□□ 0.04
RTL6Q6ICC9 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
RTL6Q6ICC9 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RTL6Q6ICC9 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RTL6Q6ICC9 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
RTL6Q6ICC9 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC15.28■□□□□ 0.04
RTL6Q6ICC9 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RTL6Q6ICC9 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RTL6Q6ICC9 LYSMD4-203ENST00000378904 2122 ntBASIC15.28■□□□□ 0.04
RTL6Q6ICC9 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
RTL6Q6ICC9 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC15.28■□□□□ 0.04
RTL6Q6ICC9 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RTL6Q6ICC9 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC15.28■□□□□ 0.04
RTL6Q6ICC9 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RTL6Q6ICC9 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RTL6Q6ICC9 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC15.28■□□□□ 0.04
RTL6Q6ICC9 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC15.28■□□□□ 0.04
RTL6Q6ICC9 AC087163.2-201ENST00000457299 853 ntBASIC15.28■□□□□ 0.04
RTL6Q6ICC9 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC15.28■□□□□ 0.04
RTL6Q6ICC9 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC15.28■□□□□ 0.04
RTL6Q6ICC9 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC15.28■□□□□ 0.04
RTL6Q6ICC9 MED16-214ENST00000617672 554 ntTSL 5 BASIC15.28■□□□□ 0.04
RTL6Q6ICC9 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC15.28■□□□□ 0.04
RTL6Q6ICC9 CITED2-204ENST00000618718 901 ntTSL 2 BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms