Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC20.24■□□□□ 0.83
RNF20Q5VTR2 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC20.24■□□□□ 0.83
RNF20Q5VTR2 CYGB-205ENST00000590175 830 ntTSL 3 BASIC20.24■□□□□ 0.83
RNF20Q5VTR2 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RNF20Q5VTR2 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC20.24■□□□□ 0.83
RNF20Q5VTR2 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RNF20Q5VTR2 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RNF20Q5VTR2 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC20.24■□□□□ 0.83
RNF20Q5VTR2 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RNF20Q5VTR2 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RNF20Q5VTR2 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RNF20Q5VTR2 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC20.24■□□□□ 0.83
RNF20Q5VTR2 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
RNF20Q5VTR2 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
RNF20Q5VTR2 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RNF20Q5VTR2 TOP3BP1-201ENST00000420768 1380 ntBASIC20.23■□□□□ 0.83
RNF20Q5VTR2 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
RNF20Q5VTR2 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC20.23■□□□□ 0.83
RNF20Q5VTR2 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RNF20Q5VTR2 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC20.23■□□□□ 0.83
RNF20Q5VTR2 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RNF20Q5VTR2 PCDHA14-201ENST00000506751 2298 ntBASIC20.23■□□□□ 0.83
RNF20Q5VTR2 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RNF20Q5VTR2 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RNF20Q5VTR2 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RNF20Q5VTR2 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC20.23■□□□□ 0.83
RNF20Q5VTR2 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC20.23■□□□□ 0.83
RNF20Q5VTR2 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC20.23■□□□□ 0.83
RNF20Q5VTR2 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC20.23■□□□□ 0.83
RNF20Q5VTR2 KRT18P27-201ENST00000427733 1299 ntBASIC20.23■□□□□ 0.83
RNF20Q5VTR2 FAM197Y8-203ENST00000450145 560 ntBASIC20.23■□□□□ 0.83
RNF20Q5VTR2 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC20.23■□□□□ 0.83
RNF20Q5VTR2 AF186996.4-201ENST00000467186 377 ntBASIC20.23■□□□□ 0.83
RNF20Q5VTR2 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
RNF20Q5VTR2 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC20.23■□□□□ 0.83
RNF20Q5VTR2 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC20.23■□□□□ 0.83
RNF20Q5VTR2 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC20.23■□□□□ 0.83
RNF20Q5VTR2 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC20.23■□□□□ 0.83
RNF20Q5VTR2 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC20.23■□□□□ 0.83
RNF20Q5VTR2 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
RNF20Q5VTR2 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RNF20Q5VTR2 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RNF20Q5VTR2 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC20.23■□□□□ 0.83
RNF20Q5VTR2 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RNF20Q5VTR2 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RNF20Q5VTR2 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC20.23■□□□□ 0.83
RNF20Q5VTR2 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RNF20Q5VTR2 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RNF20Q5VTR2 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC20.23■□□□□ 0.83
RNF20Q5VTR2 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
RNF20Q5VTR2 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC20.23■□□□□ 0.83
RNF20Q5VTR2 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RNF20Q5VTR2 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
RNF20Q5VTR2 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RNF20Q5VTR2 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC20.23■□□□□ 0.83
RNF20Q5VTR2 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
RNF20Q5VTR2 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC20.23■□□□□ 0.83
RNF20Q5VTR2 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RNF20Q5VTR2 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC20.22■□□□□ 0.83
RNF20Q5VTR2 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC20.22■□□□□ 0.83
RNF20Q5VTR2 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RNF20Q5VTR2 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RNF20Q5VTR2 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC20.22■□□□□ 0.83
RNF20Q5VTR2 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
RNF20Q5VTR2 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
RNF20Q5VTR2 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC20.22■□□□□ 0.83
RNF20Q5VTR2 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RNF20Q5VTR2 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC20.22■□□□□ 0.83
RNF20Q5VTR2 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
RNF20Q5VTR2 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RNF20Q5VTR2 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RNF20Q5VTR2 RPS2P28-201ENST00000314255 741 ntBASIC20.22■□□□□ 0.83
RNF20Q5VTR2 AC004870.1-201ENST00000315132 882 ntBASIC20.22■□□□□ 0.83
RNF20Q5VTR2 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RNF20Q5VTR2 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
RNF20Q5VTR2 AC087163.2-201ENST00000457299 853 ntBASIC20.22■□□□□ 0.83
RNF20Q5VTR2 AC136632.2-201ENST00000512891 861 ntBASIC20.22■□□□□ 0.83
RNF20Q5VTR2 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC20.22■□□□□ 0.83
RNF20Q5VTR2 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RNF20Q5VTR2 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC20.22■□□□□ 0.83
RNF20Q5VTR2 TP73-AS1-207ENST00000624167 988 ntBASIC20.22■□□□□ 0.83
RNF20Q5VTR2 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
RNF20Q5VTR2 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RNF20Q5VTR2 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
RNF20Q5VTR2 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RNF20Q5VTR2 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RNF20Q5VTR2 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
RNF20Q5VTR2 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC20.22■□□□□ 0.83
RNF20Q5VTR2 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
RNF20Q5VTR2 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RNF20Q5VTR2 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC20.22■□□□□ 0.83
RNF20Q5VTR2 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RNF20Q5VTR2 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
RNF20Q5VTR2 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RNF20Q5VTR2 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
RNF20Q5VTR2 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RNF20Q5VTR2 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
RNF20Q5VTR2 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC20.21■□□□□ 0.83
RNF20Q5VTR2 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
RNF20Q5VTR2 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms