Protein–RNA interactions for Protein: Q2NKX8

ERCC6L, DNA excision repair protein ERCC-6-like, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6LQ2NKX8 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
ERCC6LQ2NKX8 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
ERCC6LQ2NKX8 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC17.99■□□□□ 0.47
ERCC6LQ2NKX8 NUDT16P1-203ENST00000513809 620 ntBASIC17.99■□□□□ 0.47
ERCC6LQ2NKX8 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC17.99■□□□□ 0.47
ERCC6LQ2NKX8 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC17.99■□□□□ 0.47
ERCC6LQ2NKX8 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ERCC6LQ2NKX8 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC17.99■□□□□ 0.47
ERCC6LQ2NKX8 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC17.99■□□□□ 0.47
ERCC6LQ2NKX8 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
ERCC6LQ2NKX8 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ERCC6LQ2NKX8 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC17.99■□□□□ 0.47
ERCC6LQ2NKX8 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
ERCC6LQ2NKX8 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ERCC6LQ2NKX8 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ERCC6LQ2NKX8 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ERCC6LQ2NKX8 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
ERCC6LQ2NKX8 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ERCC6LQ2NKX8 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
ERCC6LQ2NKX8 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
ERCC6LQ2NKX8 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
ERCC6LQ2NKX8 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
ERCC6LQ2NKX8 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC17.99■□□□□ 0.47
ERCC6LQ2NKX8 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ERCC6LQ2NKX8 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ERCC6LQ2NKX8 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC17.98■□□□□ 0.47
ERCC6LQ2NKX8 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
ERCC6LQ2NKX8 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
ERCC6LQ2NKX8 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ERCC6LQ2NKX8 FAM45BP-202ENST00000592932 1624 ntBASIC17.98■□□□□ 0.47
ERCC6LQ2NKX8 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
ERCC6LQ2NKX8 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
ERCC6LQ2NKX8 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC17.98■□□□□ 0.47
ERCC6LQ2NKX8 AP005117.1-202ENST00000581724 1908 ntBASIC17.98■□□□□ 0.47
ERCC6LQ2NKX8 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
ERCC6LQ2NKX8 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ERCC6LQ2NKX8 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
ERCC6LQ2NKX8 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
ERCC6LQ2NKX8 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
ERCC6LQ2NKX8 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ERCC6LQ2NKX8 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC17.98■□□□□ 0.47
ERCC6LQ2NKX8 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
ERCC6LQ2NKX8 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC17.98■□□□□ 0.47
ERCC6LQ2NKX8 MIR3917-201ENST00000580971 93 ntBASIC17.98■□□□□ 0.47
ERCC6LQ2NKX8 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC17.98■□□□□ 0.47
ERCC6LQ2NKX8 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
ERCC6LQ2NKX8 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC17.98■□□□□ 0.47
ERCC6LQ2NKX8 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC17.98■□□□□ 0.47
ERCC6LQ2NKX8 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC17.98■□□□□ 0.47
ERCC6LQ2NKX8 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC17.98■□□□□ 0.47
ERCC6LQ2NKX8 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC17.98■□□□□ 0.47
ERCC6LQ2NKX8 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
ERCC6LQ2NKX8 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC17.98■□□□□ 0.47
ERCC6LQ2NKX8 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC17.98■□□□□ 0.47
ERCC6LQ2NKX8 AL135905.2-201ENST00000584934 1404 ntBASIC17.98■□□□□ 0.47
ERCC6LQ2NKX8 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ERCC6LQ2NKX8 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC17.98■□□□□ 0.47
ERCC6LQ2NKX8 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC17.97■□□□□ 0.47
ERCC6LQ2NKX8 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ERCC6LQ2NKX8 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
ERCC6LQ2NKX8 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
ERCC6LQ2NKX8 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ERCC6LQ2NKX8 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
ERCC6LQ2NKX8 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
ERCC6LQ2NKX8 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
ERCC6LQ2NKX8 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
ERCC6LQ2NKX8 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC17.97■□□□□ 0.47
ERCC6LQ2NKX8 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ERCC6LQ2NKX8 PEX7-202ENST00000367756 680 ntTSL 3 BASIC17.97■□□□□ 0.47
ERCC6LQ2NKX8 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
ERCC6LQ2NKX8 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
ERCC6LQ2NKX8 GCSHP5-201ENST00000443090 522 ntBASIC17.97■□□□□ 0.47
ERCC6LQ2NKX8 UBE2SP1-201ENST00000450587 669 ntBASIC17.97■□□□□ 0.47
ERCC6LQ2NKX8 AC098590.1-201ENST00000468126 897 ntBASIC17.97■□□□□ 0.47
ERCC6LQ2NKX8 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC17.97■□□□□ 0.47
ERCC6LQ2NKX8 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC17.97■□□□□ 0.47
ERCC6LQ2NKX8 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC17.97■□□□□ 0.47
ERCC6LQ2NKX8 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
ERCC6LQ2NKX8 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ERCC6LQ2NKX8 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC17.97■□□□□ 0.47
ERCC6LQ2NKX8 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC17.97■□□□□ 0.47
ERCC6LQ2NKX8 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
ERCC6LQ2NKX8 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
ERCC6LQ2NKX8 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ERCC6LQ2NKX8 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
ERCC6LQ2NKX8 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC17.97■□□□□ 0.47
ERCC6LQ2NKX8 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ERCC6LQ2NKX8 SRI-203ENST00000419179 1307 ntTSL 2 BASIC17.97■□□□□ 0.47
ERCC6LQ2NKX8 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ERCC6LQ2NKX8 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ERCC6LQ2NKX8 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC17.96■□□□□ 0.47
ERCC6LQ2NKX8 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
ERCC6LQ2NKX8 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
ERCC6LQ2NKX8 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
ERCC6LQ2NKX8 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ERCC6LQ2NKX8 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ERCC6LQ2NKX8 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC17.96■□□□□ 0.47
ERCC6LQ2NKX8 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC17.96■□□□□ 0.47
ERCC6LQ2NKX8 WARS-232ENST00000556645 2508 ntTSL 5 BASIC17.96■□□□□ 0.47
ERCC6LQ2NKX8 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms