Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PDS5AQ29RF7 UXT-AS1-201ENST00000590504 1525 ntBASIC20.16■□□□□ 0.82
PDS5AQ29RF7 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
PDS5AQ29RF7 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
PDS5AQ29RF7 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PDS5AQ29RF7 FAM86GP-201ENST00000448322 971 ntBASIC20.16■□□□□ 0.82
PDS5AQ29RF7 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PDS5AQ29RF7 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PDS5AQ29RF7 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC20.16■□□□□ 0.82
PDS5AQ29RF7 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PDS5AQ29RF7 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC20.16■□□□□ 0.82
PDS5AQ29RF7 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PDS5AQ29RF7 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PDS5AQ29RF7 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC20.16■□□□□ 0.82
PDS5AQ29RF7 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC20.16■□□□□ 0.82
PDS5AQ29RF7 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PDS5AQ29RF7 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PDS5AQ29RF7 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PDS5AQ29RF7 NARF-206ENST00000457415 1668 ntTSL 5 BASIC20.16■□□□□ 0.82
PDS5AQ29RF7 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PDS5AQ29RF7 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC20.16■□□□□ 0.82
PDS5AQ29RF7 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PDS5AQ29RF7 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PDS5AQ29RF7 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC20.16■□□□□ 0.82
PDS5AQ29RF7 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
PDS5AQ29RF7 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PDS5AQ29RF7 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PDS5AQ29RF7 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PDS5AQ29RF7 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
PDS5AQ29RF7 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PDS5AQ29RF7 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
PDS5AQ29RF7 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
PDS5AQ29RF7 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
PDS5AQ29RF7 AC139713.2-201ENST00000641328 2723 ntBASIC20.15■□□□□ 0.82
PDS5AQ29RF7 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
PDS5AQ29RF7 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC20.15■□□□□ 0.82
PDS5AQ29RF7 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC20.15■□□□□ 0.82
PDS5AQ29RF7 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
PDS5AQ29RF7 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PDS5AQ29RF7 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC20.15■□□□□ 0.82
PDS5AQ29RF7 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PDS5AQ29RF7 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC20.15■□□□□ 0.82
PDS5AQ29RF7 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC20.15■□□□□ 0.82
PDS5AQ29RF7 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC20.15■□□□□ 0.82
PDS5AQ29RF7 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC20.15■□□□□ 0.82
PDS5AQ29RF7 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC20.15■□□□□ 0.82
PDS5AQ29RF7 ALG1L8P-201ENST00000533887 760 ntBASIC20.15■□□□□ 0.82
PDS5AQ29RF7 AL138918.1-201ENST00000568306 659 ntBASIC20.15■□□□□ 0.82
PDS5AQ29RF7 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC20.15■□□□□ 0.82
PDS5AQ29RF7 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC20.15■□□□□ 0.82
PDS5AQ29RF7 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
PDS5AQ29RF7 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
PDS5AQ29RF7 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
PDS5AQ29RF7 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PDS5AQ29RF7 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PDS5AQ29RF7 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
PDS5AQ29RF7 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PDS5AQ29RF7 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
PDS5AQ29RF7 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PDS5AQ29RF7 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
PDS5AQ29RF7 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
PDS5AQ29RF7 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC20.14■□□□□ 0.82
PDS5AQ29RF7 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
PDS5AQ29RF7 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.82
PDS5AQ29RF7 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
PDS5AQ29RF7 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC20.14■□□□□ 0.82
PDS5AQ29RF7 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
PDS5AQ29RF7 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC20.14■□□□□ 0.82
PDS5AQ29RF7 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PDS5AQ29RF7 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
PDS5AQ29RF7 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PDS5AQ29RF7 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
PDS5AQ29RF7 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC20.14■□□□□ 0.81
PDS5AQ29RF7 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PDS5AQ29RF7 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC20.14■□□□□ 0.81
PDS5AQ29RF7 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC20.14■□□□□ 0.81
PDS5AQ29RF7 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC20.14■□□□□ 0.81
PDS5AQ29RF7 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PDS5AQ29RF7 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC20.14■□□□□ 0.81
PDS5AQ29RF7 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
PDS5AQ29RF7 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PDS5AQ29RF7 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PDS5AQ29RF7 AC093512.1-201ENST00000617969 520 ntBASIC20.14■□□□□ 0.81
PDS5AQ29RF7 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PDS5AQ29RF7 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PDS5AQ29RF7 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PDS5AQ29RF7 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC20.14■□□□□ 0.81
PDS5AQ29RF7 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
PDS5AQ29RF7 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
PDS5AQ29RF7 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
PDS5AQ29RF7 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
PDS5AQ29RF7 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PDS5AQ29RF7 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PDS5AQ29RF7 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
PDS5AQ29RF7 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PDS5AQ29RF7 AL671710.1-201ENST00000610245 2349 ntBASIC20.14■□□□□ 0.81
PDS5AQ29RF7 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PDS5AQ29RF7 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PDS5AQ29RF7 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC20.14■□□□□ 0.81
PDS5AQ29RF7 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms