Protein–RNA interactions for Protein: Q03692

COL10A1, Collagen alpha-1(X) chain, humanhuman

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL10A1Q03692 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
COL10A1Q03692 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
COL10A1Q03692 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
COL10A1Q03692 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
COL10A1Q03692 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC14.35□□□□□ -0.11
COL10A1Q03692 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
COL10A1Q03692 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
COL10A1Q03692 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC14.35□□□□□ -0.11
COL10A1Q03692 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC14.35□□□□□ -0.11
COL10A1Q03692 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC14.35□□□□□ -0.11
COL10A1Q03692 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC14.35□□□□□ -0.11
COL10A1Q03692 AC106886.4-201ENST00000623557 2502 ntBASIC14.35□□□□□ -0.11
COL10A1Q03692 AC068418.2-201ENST00000577309 3703 ntBASIC14.35□□□□□ -0.11
COL10A1Q03692 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
COL10A1Q03692 FER1L4-210ENST00000615531 5998 ntBASIC14.34□□□□□ -0.11
COL10A1Q03692 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
COL10A1Q03692 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
COL10A1Q03692 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC14.34□□□□□ -0.11
COL10A1Q03692 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
COL10A1Q03692 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
COL10A1Q03692 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
COL10A1Q03692 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
COL10A1Q03692 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
COL10A1Q03692 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
COL10A1Q03692 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC14.34□□□□□ -0.11
COL10A1Q03692 DUSP5P1-201ENST00000441325 1139 ntBASIC14.34□□□□□ -0.11
COL10A1Q03692 RNF151-202ENST00000569210 853 ntTSL 2 BASIC14.34□□□□□ -0.11
COL10A1Q03692 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
COL10A1Q03692 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
COL10A1Q03692 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
COL10A1Q03692 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC14.34□□□□□ -0.11
COL10A1Q03692 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
COL10A1Q03692 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
COL10A1Q03692 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
COL10A1Q03692 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
COL10A1Q03692 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
COL10A1Q03692 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
COL10A1Q03692 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
COL10A1Q03692 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
COL10A1Q03692 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
COL10A1Q03692 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
COL10A1Q03692 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
COL10A1Q03692 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
COL10A1Q03692 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
COL10A1Q03692 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
COL10A1Q03692 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC14.33□□□□□ -0.11
COL10A1Q03692 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC14.33□□□□□ -0.11
COL10A1Q03692 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
COL10A1Q03692 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
COL10A1Q03692 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
COL10A1Q03692 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
COL10A1Q03692 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
COL10A1Q03692 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
COL10A1Q03692 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
COL10A1Q03692 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
COL10A1Q03692 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC14.33□□□□□ -0.12
COL10A1Q03692 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
COL10A1Q03692 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
COL10A1Q03692 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
COL10A1Q03692 AL450487.1-201ENST00000426799 995 ntBASIC14.33□□□□□ -0.12
COL10A1Q03692 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
COL10A1Q03692 BMF-207ENST00000559701 630 ntTSL 3 BASIC14.33□□□□□ -0.12
COL10A1Q03692 AC139887.3-201ENST00000568585 713 ntBASIC14.33□□□□□ -0.12
COL10A1Q03692 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC14.33□□□□□ -0.12
COL10A1Q03692 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC14.33□□□□□ -0.12
COL10A1Q03692 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
COL10A1Q03692 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
COL10A1Q03692 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
COL10A1Q03692 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
COL10A1Q03692 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
COL10A1Q03692 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
COL10A1Q03692 AL590787.1-201ENST00000568856 1315 ntBASIC14.33□□□□□ -0.12
COL10A1Q03692 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
COL10A1Q03692 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
COL10A1Q03692 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
COL10A1Q03692 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
COL10A1Q03692 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC14.32□□□□□ -0.12
COL10A1Q03692 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
COL10A1Q03692 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC14.32□□□□□ -0.12
COL10A1Q03692 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
COL10A1Q03692 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC14.32□□□□□ -0.12
COL10A1Q03692 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC14.32□□□□□ -0.12
COL10A1Q03692 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC14.32□□□□□ -0.12
COL10A1Q03692 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
COL10A1Q03692 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
COL10A1Q03692 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
COL10A1Q03692 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC14.32□□□□□ -0.12
COL10A1Q03692 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
COL10A1Q03692 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
COL10A1Q03692 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
COL10A1Q03692 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
COL10A1Q03692 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
COL10A1Q03692 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
COL10A1Q03692 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
COL10A1Q03692 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
COL10A1Q03692 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
COL10A1Q03692 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
COL10A1Q03692 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC14.32□□□□□ -0.12
COL10A1Q03692 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
COL10A1Q03692 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms