Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
IRX4P78413 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC17.69■□□□□ 0.42
IRX4P78413 RPS29-206ENST00000557111 488 ntTSL 2 BASIC17.69■□□□□ 0.42
IRX4P78413 RNF151-202ENST00000569210 853 ntTSL 2 BASIC17.69■□□□□ 0.42
IRX4P78413 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC17.69■□□□□ 0.42
IRX4P78413 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC17.69■□□□□ 0.42
IRX4P78413 AL596442.2-201ENST00000610240 980 ntBASIC17.69■□□□□ 0.42
IRX4P78413 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC17.69■□□□□ 0.42
IRX4P78413 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
IRX4P78413 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC17.69■□□□□ 0.42
IRX4P78413 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
IRX4P78413 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
IRX4P78413 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17.69■□□□□ 0.42
IRX4P78413 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
IRX4P78413 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
IRX4P78413 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
IRX4P78413 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC17.69■□□□□ 0.42
IRX4P78413 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
IRX4P78413 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
IRX4P78413 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
IRX4P78413 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
IRX4P78413 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
IRX4P78413 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
IRX4P78413 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.68■□□□□ 0.42
IRX4P78413 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
IRX4P78413 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
IRX4P78413 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC17.68■□□□□ 0.42
IRX4P78413 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
IRX4P78413 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC17.68■□□□□ 0.42
IRX4P78413 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC17.68■□□□□ 0.42
IRX4P78413 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
IRX4P78413 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC17.68■□□□□ 0.42
IRX4P78413 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
IRX4P78413 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
IRX4P78413 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
IRX4P78413 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
IRX4P78413 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
IRX4P78413 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
IRX4P78413 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC17.68■□□□□ 0.42
IRX4P78413 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
IRX4P78413 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
IRX4P78413 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
IRX4P78413 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
IRX4P78413 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC17.68■□□□□ 0.42
IRX4P78413 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC17.68■□□□□ 0.42
IRX4P78413 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC17.68■□□□□ 0.42
IRX4P78413 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
IRX4P78413 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
IRX4P78413 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
IRX4P78413 AC079328.2-201ENST00000561241 3354 ntBASIC17.68■□□□□ 0.42
IRX4P78413 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
IRX4P78413 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
IRX4P78413 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
IRX4P78413 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
IRX4P78413 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
IRX4P78413 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
IRX4P78413 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
IRX4P78413 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
IRX4P78413 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
IRX4P78413 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
IRX4P78413 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
IRX4P78413 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
IRX4P78413 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
IRX4P78413 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC17.67■□□□□ 0.42
IRX4P78413 CTNS-203ENST00000399306 803 ntTSL 3 BASIC17.67■□□□□ 0.42
IRX4P78413 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
IRX4P78413 LAGE3P1-201ENST00000425356 484 ntBASIC17.67■□□□□ 0.42
IRX4P78413 SRP19-202ENST00000445150 833 ntTSL 2 BASIC17.67■□□□□ 0.42
IRX4P78413 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC17.67■□□□□ 0.42
IRX4P78413 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC17.67■□□□□ 0.42
IRX4P78413 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC17.67■□□□□ 0.42
IRX4P78413 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
IRX4P78413 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC17.67■□□□□ 0.42
IRX4P78413 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC17.67■□□□□ 0.42
IRX4P78413 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
IRX4P78413 AL121761.2-201ENST00000598007 1648 ntBASIC17.67■□□□□ 0.42
IRX4P78413 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
IRX4P78413 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC17.67■□□□□ 0.42
IRX4P78413 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.67■□□□□ 0.42
IRX4P78413 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
IRX4P78413 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
IRX4P78413 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
IRX4P78413 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
IRX4P78413 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC17.67■□□□□ 0.42
IRX4P78413 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
IRX4P78413 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
IRX4P78413 CES3-203ENST00000543856 3178 ntTSL 2 BASIC17.67■□□□□ 0.42
IRX4P78413 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
IRX4P78413 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC17.66■□□□□ 0.42
IRX4P78413 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
IRX4P78413 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
IRX4P78413 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
IRX4P78413 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
IRX4P78413 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC17.66■□□□□ 0.42
IRX4P78413 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC17.66■□□□□ 0.42
IRX4P78413 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC17.66■□□□□ 0.42
IRX4P78413 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC17.66■□□□□ 0.42
IRX4P78413 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC17.66■□□□□ 0.42
IRX4P78413 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC17.66■□□□□ 0.42
IRX4P78413 AP000867.4-201ENST00000641616 219 ntBASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms