Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC17.13■□□□□ 0.33
PRAMEP78395 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC17.13■□□□□ 0.33
PRAMEP78395 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC17.13■□□□□ 0.33
PRAMEP78395 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC17.13■□□□□ 0.33
PRAMEP78395 FGFR3P6-201ENST00000457012 610 ntBASIC17.13■□□□□ 0.33
PRAMEP78395 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC17.13■□□□□ 0.33
PRAMEP78395 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PRAMEP78395 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC17.13■□□□□ 0.33
PRAMEP78395 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
PRAMEP78395 AC064862.7-201ENST00000604520 867 ntBASIC17.13■□□□□ 0.33
PRAMEP78395 AL353135.1-201ENST00000606729 504 ntBASIC17.13■□□□□ 0.33
PRAMEP78395 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PRAMEP78395 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
PRAMEP78395 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
PRAMEP78395 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PRAMEP78395 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC17.13■□□□□ 0.33
PRAMEP78395 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PRAMEP78395 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PRAMEP78395 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC17.12■□□□□ 0.33
PRAMEP78395 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PRAMEP78395 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PRAMEP78395 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PRAMEP78395 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
PRAMEP78395 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
PRAMEP78395 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PRAMEP78395 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
PRAMEP78395 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PRAMEP78395 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PRAMEP78395 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
PRAMEP78395 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PRAMEP78395 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC17.12■□□□□ 0.33
PRAMEP78395 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC17.12■□□□□ 0.33
PRAMEP78395 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC17.12■□□□□ 0.33
PRAMEP78395 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PRAMEP78395 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PRAMEP78395 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PRAMEP78395 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
PRAMEP78395 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PRAMEP78395 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC17.12■□□□□ 0.33
PRAMEP78395 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC17.12■□□□□ 0.33
PRAMEP78395 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PRAMEP78395 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC17.12■□□□□ 0.33
PRAMEP78395 SART3-203ENST00000546611 1184 ntBASIC17.12■□□□□ 0.33
PRAMEP78395 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC17.12■□□□□ 0.33
PRAMEP78395 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
PRAMEP78395 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC17.12■□□□□ 0.33
PRAMEP78395 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC17.12■□□□□ 0.33
PRAMEP78395 TBCB-205ENST00000585746 875 ntTSL 3 BASIC17.12■□□□□ 0.33
PRAMEP78395 IFNL4P1-201ENST00000607083 540 ntBASIC17.12■□□□□ 0.33
PRAMEP78395 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC17.12■□□□□ 0.33
PRAMEP78395 AL589182.2-201ENST00000619332 1049 ntBASIC17.12■□□□□ 0.33
PRAMEP78395 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PRAMEP78395 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
PRAMEP78395 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PRAMEP78395 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PRAMEP78395 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC17.12■□□□□ 0.33
PRAMEP78395 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PRAMEP78395 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC17.12■□□□□ 0.33
PRAMEP78395 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC17.12■□□□□ 0.33
PRAMEP78395 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PRAMEP78395 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PRAMEP78395 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC17.12■□□□□ 0.33
PRAMEP78395 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
PRAMEP78395 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PRAMEP78395 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC17.12■□□□□ 0.33
PRAMEP78395 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC17.12■□□□□ 0.33
PRAMEP78395 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.12■□□□□ 0.33
PRAMEP78395 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
PRAMEP78395 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
PRAMEP78395 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PRAMEP78395 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
PRAMEP78395 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PRAMEP78395 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
PRAMEP78395 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC17.11■□□□□ 0.33
PRAMEP78395 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PRAMEP78395 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PRAMEP78395 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
PRAMEP78395 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PRAMEP78395 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC17.11■□□□□ 0.33
PRAMEP78395 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
PRAMEP78395 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PRAMEP78395 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
PRAMEP78395 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
PRAMEP78395 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PRAMEP78395 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PRAMEP78395 IPPK-202ENST00000375522 882 ntTSL 3 BASIC17.11■□□□□ 0.33
PRAMEP78395 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PRAMEP78395 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PRAMEP78395 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC17.11■□□□□ 0.33
PRAMEP78395 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PRAMEP78395 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC17.11■□□□□ 0.33
PRAMEP78395 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC17.11■□□□□ 0.33
PRAMEP78395 MTDHP4-201ENST00000600287 670 ntBASIC17.11■□□□□ 0.33
PRAMEP78395 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PRAMEP78395 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PRAMEP78395 TUBB8P12-201ENST00000308911 1335 ntBASIC17.11■□□□□ 0.33
PRAMEP78395 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PRAMEP78395 TUBB7P-202ENST00000428444 1305 ntBASIC17.11■□□□□ 0.33
PRAMEP78395 TUBB8P7-204ENST00000567960 1332 ntBASIC17.11■□□□□ 0.33
PRAMEP78395 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms