Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
FOXG1P55316 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
FOXG1P55316 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC14.83□□□□□ -0.04
FOXG1P55316 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
FOXG1P55316 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
FOXG1P55316 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
FOXG1P55316 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
FOXG1P55316 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
FOXG1P55316 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC14.82□□□□□ -0.04
FOXG1P55316 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
FOXG1P55316 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
FOXG1P55316 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
FOXG1P55316 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
FOXG1P55316 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC14.82□□□□□ -0.04
FOXG1P55316 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
FOXG1P55316 MCCD1P2-201ENST00000423228 335 ntBASIC14.82□□□□□ -0.04
FOXG1P55316 AC074386.1-202ENST00000463561 864 ntBASIC14.82□□□□□ -0.04
FOXG1P55316 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC14.82□□□□□ -0.04
FOXG1P55316 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC14.82□□□□□ -0.04
FOXG1P55316 AC005412.3-201ENST00000580309 715 ntBASIC14.82□□□□□ -0.04
FOXG1P55316 MIR4515-201ENST00000584082 81 ntBASIC14.82□□□□□ -0.04
FOXG1P55316 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC14.82□□□□□ -0.04
FOXG1P55316 AL078644.1-201ENST00000609881 752 ntBASIC14.82□□□□□ -0.04
FOXG1P55316 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
FOXG1P55316 MED16-214ENST00000617672 554 ntTSL 5 BASIC14.82□□□□□ -0.04
FOXG1P55316 HOTTIP_1.1-201ENST00000620415 57 ntBASIC14.82□□□□□ -0.04
FOXG1P55316 PCDHA12-202ENST00000613593 2588 ntBASIC14.82□□□□□ -0.04
FOXG1P55316 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
FOXG1P55316 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
FOXG1P55316 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
FOXG1P55316 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
FOXG1P55316 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
FOXG1P55316 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
FOXG1P55316 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
FOXG1P55316 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
FOXG1P55316 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
FOXG1P55316 AL353732.1-201ENST00000569618 1459 ntBASIC14.82□□□□□ -0.04
FOXG1P55316 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
FOXG1P55316 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
FOXG1P55316 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
FOXG1P55316 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
FOXG1P55316 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
FOXG1P55316 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
FOXG1P55316 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC14.81□□□□□ -0.04
FOXG1P55316 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC14.81□□□□□ -0.04
FOXG1P55316 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
FOXG1P55316 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC14.81□□□□□ -0.04
FOXG1P55316 AC131009.4-201ENST00000624048 1740 ntBASIC14.81□□□□□ -0.04
FOXG1P55316 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
FOXG1P55316 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
FOXG1P55316 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
FOXG1P55316 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
FOXG1P55316 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC14.81□□□□□ -0.04
FOXG1P55316 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
FOXG1P55316 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
FOXG1P55316 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
FOXG1P55316 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC14.81□□□□□ -0.04
FOXG1P55316 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC14.81□□□□□ -0.04
FOXG1P55316 KRT18P13-201ENST00000400056 1290 ntBASIC14.81□□□□□ -0.04
FOXG1P55316 RPSAP43-201ENST00000402237 625 ntBASIC14.81□□□□□ -0.04
FOXG1P55316 FALEC-201ENST00000416894 566 ntTSL 3 BASIC14.81□□□□□ -0.04
FOXG1P55316 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC14.81□□□□□ -0.04
FOXG1P55316 GPX1P2-201ENST00000429271 606 ntBASIC14.81□□□□□ -0.04
FOXG1P55316 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
FOXG1P55316 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC14.81□□□□□ -0.04
FOXG1P55316 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC14.81□□□□□ -0.04
FOXG1P55316 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
FOXG1P55316 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC14.81□□□□□ -0.04
FOXG1P55316 MIR4492-201ENST00000581627 80 ntBASIC14.81□□□□□ -0.04
FOXG1P55316 AC055717.3-201ENST00000622967 595 ntBASIC14.81□□□□□ -0.04
FOXG1P55316 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
FOXG1P55316 NF2-208ENST00000403435 2568 ntTSL 5 BASIC14.81□□□□□ -0.04
FOXG1P55316 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
FOXG1P55316 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
FOXG1P55316 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC14.81□□□□□ -0.04
FOXG1P55316 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
FOXG1P55316 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
FOXG1P55316 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
FOXG1P55316 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC14.81□□□□□ -0.04
FOXG1P55316 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
FOXG1P55316 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC14.81□□□□□ -0.04
FOXG1P55316 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
FOXG1P55316 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC14.81□□□□□ -0.04
FOXG1P55316 AL671710.1-201ENST00000610245 2349 ntBASIC14.81□□□□□ -0.04
FOXG1P55316 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
FOXG1P55316 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
FOXG1P55316 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
FOXG1P55316 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
FOXG1P55316 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC14.8□□□□□ -0.04
FOXG1P55316 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
FOXG1P55316 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
FOXG1P55316 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
FOXG1P55316 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
FOXG1P55316 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
FOXG1P55316 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
FOXG1P55316 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
FOXG1P55316 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
FOXG1P55316 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
FOXG1P55316 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
FOXG1P55316 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms