Protein–RNA interactions for Protein: P54727

RAD23B, UV excision repair protein RAD23 homolog B, humanhuman

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD23BP54727 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RAD23BP54727 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RAD23BP54727 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC18.12■□□□□ 0.49
RAD23BP54727 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RAD23BP54727 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RAD23BP54727 SLC4A1APP2-201ENST00000424054 1259 ntBASIC18.12■□□□□ 0.49
RAD23BP54727 RPL13AP23-201ENST00000480739 586 ntBASIC18.12■□□□□ 0.49
RAD23BP54727 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC18.12■□□□□ 0.49
RAD23BP54727 SLC25A1P1-201ENST00000528351 927 ntBASIC18.12■□□□□ 0.49
RAD23BP54727 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC18.12■□□□□ 0.49
RAD23BP54727 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC18.12■□□□□ 0.49
RAD23BP54727 Z83851.2-201ENST00000609564 659 ntBASIC18.12■□□□□ 0.49
RAD23BP54727 AC120114.3-201ENST00000611923 658 ntBASIC18.12■□□□□ 0.49
RAD23BP54727 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RAD23BP54727 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC18.12■□□□□ 0.49
RAD23BP54727 REXO1L3P-201ENST00000622202 1288 ntBASIC18.12■□□□□ 0.49
RAD23BP54727 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC18.12■□□□□ 0.49
RAD23BP54727 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
RAD23BP54727 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RAD23BP54727 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RAD23BP54727 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RAD23BP54727 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC18.12■□□□□ 0.49
RAD23BP54727 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RAD23BP54727 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RAD23BP54727 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RAD23BP54727 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
RAD23BP54727 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
RAD23BP54727 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
RAD23BP54727 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RAD23BP54727 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC18.11■□□□□ 0.49
RAD23BP54727 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC18.11■□□□□ 0.49
RAD23BP54727 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC18.11■□□□□ 0.49
RAD23BP54727 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RAD23BP54727 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
RAD23BP54727 NKILA-202ENST00000614771 2598 ntBASIC18.11■□□□□ 0.49
RAD23BP54727 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RAD23BP54727 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RAD23BP54727 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC18.11■□□□□ 0.49
RAD23BP54727 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC18.11■□□□□ 0.49
RAD23BP54727 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RAD23BP54727 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC18.11■□□□□ 0.49
RAD23BP54727 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RAD23BP54727 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC18.11■□□□□ 0.49
RAD23BP54727 MRPL20P1-201ENST00000400819 433 ntBASIC18.11■□□□□ 0.49
RAD23BP54727 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
RAD23BP54727 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RAD23BP54727 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RAD23BP54727 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC18.11■□□□□ 0.49
RAD23BP54727 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
RAD23BP54727 AC034105.1-201ENST00000563488 319 ntBASIC18.11■□□□□ 0.49
RAD23BP54727 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
RAD23BP54727 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC18.11■□□□□ 0.49
RAD23BP54727 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC18.11■□□□□ 0.49
RAD23BP54727 AC104109.2-201ENST00000602919 1418 ntBASIC18.11■□□□□ 0.49
RAD23BP54727 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RAD23BP54727 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RAD23BP54727 AL121761.2-201ENST00000598007 1648 ntBASIC18.11■□□□□ 0.49
RAD23BP54727 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC18.11■□□□□ 0.49
RAD23BP54727 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC18.11■□□□□ 0.49
RAD23BP54727 AC005915.1-201ENST00000624912 2018 ntBASIC18.11■□□□□ 0.49
RAD23BP54727 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RAD23BP54727 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RAD23BP54727 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RAD23BP54727 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RAD23BP54727 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RAD23BP54727 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RAD23BP54727 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC18.1■□□□□ 0.49
RAD23BP54727 AC011676.5-201ENST00000624864 2660 ntBASIC18.1■□□□□ 0.49
RAD23BP54727 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RAD23BP54727 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RAD23BP54727 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
RAD23BP54727 AC105020.1-201ENST00000435356 2205 ntBASIC18.1■□□□□ 0.49
RAD23BP54727 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC18.1■□□□□ 0.49
RAD23BP54727 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RAD23BP54727 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC18.1■□□□□ 0.49
RAD23BP54727 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
RAD23BP54727 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC18.1■□□□□ 0.49
RAD23BP54727 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC18.1■□□□□ 0.49
RAD23BP54727 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC18.1■□□□□ 0.49
RAD23BP54727 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC18.1■□□□□ 0.49
RAD23BP54727 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RAD23BP54727 AC107918.2-201ENST00000530817 355 ntBASIC18.1■□□□□ 0.49
RAD23BP54727 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RAD23BP54727 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
RAD23BP54727 NME4-212ENST00000621774 904 ntTSL 3 BASIC18.1■□□□□ 0.49
RAD23BP54727 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RAD23BP54727 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RAD23BP54727 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RAD23BP54727 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RAD23BP54727 PCDHB17P-201ENST00000539533 2393 ntBASIC18.1■□□□□ 0.49
RAD23BP54727 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RAD23BP54727 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
RAD23BP54727 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC18.1■□□□□ 0.49
RAD23BP54727 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC18.1■□□□□ 0.49
RAD23BP54727 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RAD23BP54727 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RAD23BP54727 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RAD23BP54727 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RAD23BP54727 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC18.09■□□□□ 0.49
RAD23BP54727 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms