Protein–RNA interactions for Protein: P54709

ATP1B3, Sodium/potassium-transporting ATPase subunit beta-3, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1B3P54709 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC14.77□□□□□ -0.04
ATP1B3P54709 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
ATP1B3P54709 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
ATP1B3P54709 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC14.77□□□□□ -0.04
ATP1B3P54709 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
ATP1B3P54709 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
ATP1B3P54709 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
ATP1B3P54709 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
ATP1B3P54709 SRP19-202ENST00000445150 833 ntTSL 2 BASIC14.77□□□□□ -0.05
ATP1B3P54709 KRT17P6-201ENST00000453795 1220 ntBASIC14.77□□□□□ -0.05
ATP1B3P54709 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC14.77□□□□□ -0.05
ATP1B3P54709 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC14.77□□□□□ -0.05
ATP1B3P54709 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
ATP1B3P54709 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC14.77□□□□□ -0.05
ATP1B3P54709 AP005901.3-202ENST00000581653 237 ntBASIC14.77□□□□□ -0.05
ATP1B3P54709 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
ATP1B3P54709 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
ATP1B3P54709 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC14.77□□□□□ -0.05
ATP1B3P54709 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
ATP1B3P54709 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
ATP1B3P54709 AC132938.5-201ENST00000624980 1813 ntBASIC14.77□□□□□ -0.05
ATP1B3P54709 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
ATP1B3P54709 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC14.77□□□□□ -0.05
ATP1B3P54709 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC14.77□□□□□ -0.05
ATP1B3P54709 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
ATP1B3P54709 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
ATP1B3P54709 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC14.77□□□□□ -0.05
ATP1B3P54709 AC132872.4-202ENST00000622924 2756 ntBASIC14.77□□□□□ -0.05
ATP1B3P54709 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
ATP1B3P54709 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
ATP1B3P54709 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
ATP1B3P54709 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
ATP1B3P54709 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC14.76□□□□□ -0.05
ATP1B3P54709 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ATP1B3P54709 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ATP1B3P54709 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ATP1B3P54709 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
ATP1B3P54709 IER3-202ENST00000376377 1350 ntBASIC14.76□□□□□ -0.05
ATP1B3P54709 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC14.76□□□□□ -0.05
ATP1B3P54709 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ATP1B3P54709 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
ATP1B3P54709 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
ATP1B3P54709 MST1L-201ENST00000442552 2185 ntBASIC14.76□□□□□ -0.05
ATP1B3P54709 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
ATP1B3P54709 PPIH-202ENST00000372549 327 ntTSL 3 BASIC14.76□□□□□ -0.05
ATP1B3P54709 TOB2P1-201ENST00000469761 992 ntBASIC14.76□□□□□ -0.05
ATP1B3P54709 AC096582.2-201ENST00000510860 516 ntBASIC14.76□□□□□ -0.05
ATP1B3P54709 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC14.76□□□□□ -0.05
ATP1B3P54709 CIB2-208ENST00000560618 804 ntTSL 2 BASIC14.76□□□□□ -0.05
ATP1B3P54709 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
ATP1B3P54709 IL11-204ENST00000590625 1028 ntTSL 2 BASIC14.76□□□□□ -0.05
ATP1B3P54709 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC14.76□□□□□ -0.05
ATP1B3P54709 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ATP1B3P54709 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
ATP1B3P54709 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
ATP1B3P54709 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ATP1B3P54709 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
ATP1B3P54709 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
ATP1B3P54709 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
ATP1B3P54709 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC14.76□□□□□ -0.05
ATP1B3P54709 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ATP1B3P54709 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
ATP1B3P54709 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC14.76□□□□□ -0.05
ATP1B3P54709 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
ATP1B3P54709 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
ATP1B3P54709 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ATP1B3P54709 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
ATP1B3P54709 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
ATP1B3P54709 GPR89P-201ENST00000407924 1495 ntBASIC14.76□□□□□ -0.05
ATP1B3P54709 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
ATP1B3P54709 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC14.75□□□□□ -0.05
ATP1B3P54709 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ATP1B3P54709 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ATP1B3P54709 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
ATP1B3P54709 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
ATP1B3P54709 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ATP1B3P54709 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ATP1B3P54709 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC14.75□□□□□ -0.05
ATP1B3P54709 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
ATP1B3P54709 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
ATP1B3P54709 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC14.75□□□□□ -0.05
ATP1B3P54709 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC14.75□□□□□ -0.05
ATP1B3P54709 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ATP1B3P54709 BANP-204ENST00000393208 2283 ntTSL 2 BASIC14.75□□□□□ -0.05
ATP1B3P54709 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
ATP1B3P54709 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
ATP1B3P54709 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC14.75□□□□□ -0.05
ATP1B3P54709 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ATP1B3P54709 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
ATP1B3P54709 INTS4P1-201ENST00000438455 1935 ntBASIC14.75□□□□□ -0.05
ATP1B3P54709 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ATP1B3P54709 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ATP1B3P54709 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ATP1B3P54709 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC14.75□□□□□ -0.05
ATP1B3P54709 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ATP1B3P54709 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ATP1B3P54709 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
ATP1B3P54709 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ATP1B3P54709 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ATP1B3P54709 LINC00265-3P-201ENST00000447588 903 ntBASIC14.75□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms