Protein–RNA interactions for Protein: P49643

PRIM2, DNA primase large subunit, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM2P49643 BET1L-206ENST00000486280 665 ntTSL 3 BASIC16.19■□□□□ 0.18
PRIM2P49643 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PRIM2P49643 PNN-202ENST00000553331 656 ntTSL 3 BASIC16.19■□□□□ 0.18
PRIM2P49643 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
PRIM2P49643 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PRIM2P49643 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC16.19■□□□□ 0.18
PRIM2P49643 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC16.19■□□□□ 0.18
PRIM2P49643 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
PRIM2P49643 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PRIM2P49643 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
PRIM2P49643 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
PRIM2P49643 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
PRIM2P49643 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
PRIM2P49643 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC16.18■□□□□ 0.18
PRIM2P49643 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PRIM2P49643 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC16.18■□□□□ 0.18
PRIM2P49643 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
PRIM2P49643 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PRIM2P49643 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PRIM2P49643 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PRIM2P49643 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PRIM2P49643 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PRIM2P49643 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC16.18■□□□□ 0.18
PRIM2P49643 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PRIM2P49643 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PRIM2P49643 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC16.18■□□□□ 0.18
PRIM2P49643 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC16.18■□□□□ 0.18
PRIM2P49643 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
PRIM2P49643 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC16.18■□□□□ 0.18
PRIM2P49643 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC16.18■□□□□ 0.18
PRIM2P49643 GZMM-202ENST00000592501 941 ntTSL 3 BASIC16.18■□□□□ 0.18
PRIM2P49643 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC16.18■□□□□ 0.18
PRIM2P49643 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PRIM2P49643 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC16.18■□□□□ 0.18
PRIM2P49643 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
PRIM2P49643 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PRIM2P49643 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PRIM2P49643 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PRIM2P49643 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PRIM2P49643 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC16.18■□□□□ 0.18
PRIM2P49643 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PRIM2P49643 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
PRIM2P49643 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PRIM2P49643 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC16.18■□□□□ 0.18
PRIM2P49643 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC16.18■□□□□ 0.18
PRIM2P49643 PCDHB19P-201ENST00000570871 2371 ntBASIC16.18■□□□□ 0.18
PRIM2P49643 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PRIM2P49643 PMPCAP1-201ENST00000508114 1576 ntBASIC16.17■□□□□ 0.18
PRIM2P49643 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
PRIM2P49643 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PRIM2P49643 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PRIM2P49643 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PRIM2P49643 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC16.17■□□□□ 0.18
PRIM2P49643 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC16.17■□□□□ 0.18
PRIM2P49643 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
PRIM2P49643 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PRIM2P49643 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PRIM2P49643 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
PRIM2P49643 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC16.17■□□□□ 0.18
PRIM2P49643 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC16.17■□□□□ 0.18
PRIM2P49643 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PRIM2P49643 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC16.17■□□□□ 0.18
PRIM2P49643 NMU-205ENST00000511469 756 ntTSL 3 BASIC16.17■□□□□ 0.18
PRIM2P49643 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC16.17■□□□□ 0.18
PRIM2P49643 MIR5100-201ENST00000579544 119 ntBASIC16.17■□□□□ 0.18
PRIM2P49643 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PRIM2P49643 AL591684.3-201ENST00000605187 298 ntBASIC16.17■□□□□ 0.18
PRIM2P49643 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC16.17■□□□□ 0.18
PRIM2P49643 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC16.17■□□□□ 0.18
PRIM2P49643 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC16.17■□□□□ 0.18
PRIM2P49643 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.17■□□□□ 0.18
PRIM2P49643 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PRIM2P49643 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PRIM2P49643 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC16.17■□□□□ 0.18
PRIM2P49643 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
PRIM2P49643 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC16.17■□□□□ 0.18
PRIM2P49643 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
PRIM2P49643 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PRIM2P49643 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
PRIM2P49643 AL135999.2-201ENST00000622438 1686 ntBASIC16.17■□□□□ 0.18
PRIM2P49643 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
PRIM2P49643 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC16.17■□□□□ 0.18
PRIM2P49643 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC16.17■□□□□ 0.18
PRIM2P49643 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PRIM2P49643 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PRIM2P49643 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PRIM2P49643 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PRIM2P49643 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PRIM2P49643 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
PRIM2P49643 AC068587.6-202ENST00000641839 5619 ntBASIC16.16■□□□□ 0.18
PRIM2P49643 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PRIM2P49643 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16.16■□□□□ 0.18
PRIM2P49643 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PRIM2P49643 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
PRIM2P49643 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC16.16■□□□□ 0.18
PRIM2P49643 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC16.16■□□□□ 0.18
PRIM2P49643 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC16.16■□□□□ 0.18
PRIM2P49643 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
PRIM2P49643 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
PRIM2P49643 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms