Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC17.12■□□□□ 0.33
HLA-DPA1P20036 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
HLA-DPA1P20036 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
HLA-DPA1P20036 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HLA-DPA1P20036 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HLA-DPA1P20036 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
HLA-DPA1P20036 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HLA-DPA1P20036 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
HLA-DPA1P20036 TOP3BP1-201ENST00000420768 1380 ntBASIC17.12■□□□□ 0.33
HLA-DPA1P20036 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HLA-DPA1P20036 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
HLA-DPA1P20036 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC17.12■□□□□ 0.33
HLA-DPA1P20036 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
HLA-DPA1P20036 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HLA-DPA1P20036 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC17.11■□□□□ 0.33
HLA-DPA1P20036 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HLA-DPA1P20036 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HLA-DPA1P20036 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
HLA-DPA1P20036 NKILA-202ENST00000614771 2598 ntBASIC17.11■□□□□ 0.33
HLA-DPA1P20036 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC17.11■□□□□ 0.33
HLA-DPA1P20036 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HLA-DPA1P20036 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.11■□□□□ 0.33
HLA-DPA1P20036 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HLA-DPA1P20036 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
HLA-DPA1P20036 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC17.11■□□□□ 0.33
HLA-DPA1P20036 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HLA-DPA1P20036 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC17.11■□□□□ 0.33
HLA-DPA1P20036 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC17.11■□□□□ 0.33
HLA-DPA1P20036 MIR7706-201ENST00000613747 67 ntBASIC17.11■□□□□ 0.33
HLA-DPA1P20036 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
HLA-DPA1P20036 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HLA-DPA1P20036 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HLA-DPA1P20036 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
HLA-DPA1P20036 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HLA-DPA1P20036 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC17.11■□□□□ 0.33
HLA-DPA1P20036 AC002310.6-201ENST00000624451 1377 ntBASIC17.11■□□□□ 0.33
HLA-DPA1P20036 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HLA-DPA1P20036 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
HLA-DPA1P20036 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HLA-DPA1P20036 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HLA-DPA1P20036 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
HLA-DPA1P20036 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HLA-DPA1P20036 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
HLA-DPA1P20036 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HLA-DPA1P20036 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HLA-DPA1P20036 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HLA-DPA1P20036 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC17.1■□□□□ 0.33
HLA-DPA1P20036 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
HLA-DPA1P20036 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC17.1■□□□□ 0.33
HLA-DPA1P20036 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HLA-DPA1P20036 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HLA-DPA1P20036 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC17.1■□□□□ 0.33
HLA-DPA1P20036 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HLA-DPA1P20036 MRPL3P1-201ENST00000400109 1033 ntBASIC17.1■□□□□ 0.33
HLA-DPA1P20036 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC17.1■□□□□ 0.33
HLA-DPA1P20036 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC17.1■□□□□ 0.33
HLA-DPA1P20036 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
HLA-DPA1P20036 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC17.1■□□□□ 0.33
HLA-DPA1P20036 AC093909.1-201ENST00000504731 1122 ntBASIC17.1■□□□□ 0.33
HLA-DPA1P20036 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC17.1■□□□□ 0.33
HLA-DPA1P20036 AP001005.1-201ENST00000571755 1248 ntBASIC17.1■□□□□ 0.33
HLA-DPA1P20036 SLC25A6P4-201ENST00000586535 553 ntBASIC17.1■□□□□ 0.33
HLA-DPA1P20036 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC17.1■□□□□ 0.33
HLA-DPA1P20036 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC17.1■□□□□ 0.33
HLA-DPA1P20036 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HLA-DPA1P20036 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC17.1■□□□□ 0.33
HLA-DPA1P20036 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HLA-DPA1P20036 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
HLA-DPA1P20036 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
HLA-DPA1P20036 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
HLA-DPA1P20036 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC17.1■□□□□ 0.33
HLA-DPA1P20036 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
HLA-DPA1P20036 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
HLA-DPA1P20036 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HLA-DPA1P20036 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HLA-DPA1P20036 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
HLA-DPA1P20036 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HLA-DPA1P20036 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
HLA-DPA1P20036 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HLA-DPA1P20036 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HLA-DPA1P20036 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HLA-DPA1P20036 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
HLA-DPA1P20036 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC17.09■□□□□ 0.33
HLA-DPA1P20036 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
HLA-DPA1P20036 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.09■□□□□ 0.33
HLA-DPA1P20036 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HLA-DPA1P20036 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HLA-DPA1P20036 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HLA-DPA1P20036 CENPM-204ENST00000402420 688 ntTSL 5 BASIC17.09■□□□□ 0.33
HLA-DPA1P20036 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC17.09■□□□□ 0.33
HLA-DPA1P20036 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HLA-DPA1P20036 RIN3-211ENST00000557762 517 ntTSL 3 BASIC17.09■□□□□ 0.33
HLA-DPA1P20036 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC17.09■□□□□ 0.33
HLA-DPA1P20036 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC17.09■□□□□ 0.33
HLA-DPA1P20036 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
HLA-DPA1P20036 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HLA-DPA1P20036 LINC00895-201ENST00000629028 1637 ntBASIC17.09■□□□□ 0.33
HLA-DPA1P20036 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
HLA-DPA1P20036 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HLA-DPA1P20036 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms