Protein–RNA interactions for Protein: P08240

SRPRA, Signal recognition particle receptor subunit alpha, humanhuman

Known RBP Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRAP08240 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SRPRAP08240 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC17.05■□□□□ 0.32
SRPRAP08240 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC17.05■□□□□ 0.32
SRPRAP08240 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SRPRAP08240 CDK2AP2P3-201ENST00000422476 372 ntBASIC17.05■□□□□ 0.32
SRPRAP08240 PON3-203ENST00000427422 894 ntTSL 3 BASIC17.05■□□□□ 0.32
SRPRAP08240 KRT8P48-201ENST00000515599 1220 ntBASIC17.05■□□□□ 0.32
SRPRAP08240 AL135744.1-201ENST00000565098 629 ntBASIC17.05■□□□□ 0.32
SRPRAP08240 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC17.05■□□□□ 0.32
SRPRAP08240 RPS15-207ENST00000591032 550 ntTSL 3 BASIC17.05■□□□□ 0.32
SRPRAP08240 CYP2A7P1-201ENST00000595391 815 ntBASIC17.05■□□□□ 0.32
SRPRAP08240 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC17.05■□□□□ 0.32
SRPRAP08240 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SRPRAP08240 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SRPRAP08240 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SRPRAP08240 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
SRPRAP08240 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.05■□□□□ 0.32
SRPRAP08240 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
SRPRAP08240 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.05■□□□□ 0.32
SRPRAP08240 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
SRPRAP08240 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.05■□□□□ 0.32
SRPRAP08240 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SRPRAP08240 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
SRPRAP08240 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.04■□□□□ 0.32
SRPRAP08240 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SRPRAP08240 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC17.04■□□□□ 0.32
SRPRAP08240 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SRPRAP08240 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SRPRAP08240 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC17.04■□□□□ 0.32
SRPRAP08240 GOLGA6L17P-202ENST00000614358 1398 ntBASIC17.04■□□□□ 0.32
SRPRAP08240 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SRPRAP08240 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SRPRAP08240 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SRPRAP08240 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
SRPRAP08240 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
SRPRAP08240 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SRPRAP08240 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SRPRAP08240 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SRPRAP08240 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
SRPRAP08240 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SRPRAP08240 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
SRPRAP08240 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SRPRAP08240 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SRPRAP08240 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
SRPRAP08240 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC17.04■□□□□ 0.32
SRPRAP08240 TSEN15P1-201ENST00000423257 515 ntBASIC17.04■□□□□ 0.32
SRPRAP08240 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SRPRAP08240 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC17.04■□□□□ 0.32
SRPRAP08240 AC023141.5-201ENST00000458585 616 ntBASIC17.04■□□□□ 0.32
SRPRAP08240 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC17.04■□□□□ 0.32
SRPRAP08240 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC17.04■□□□□ 0.32
SRPRAP08240 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC17.04■□□□□ 0.32
SRPRAP08240 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
SRPRAP08240 RNF34-208ENST00000555076 593 ntTSL 3 BASIC17.04■□□□□ 0.32
SRPRAP08240 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC17.04■□□□□ 0.32
SRPRAP08240 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC17.04■□□□□ 0.32
SRPRAP08240 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC17.04■□□□□ 0.32
SRPRAP08240 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
SRPRAP08240 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
SRPRAP08240 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SRPRAP08240 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SRPRAP08240 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SRPRAP08240 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
SRPRAP08240 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SRPRAP08240 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SRPRAP08240 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
SRPRAP08240 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SRPRAP08240 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC17.04■□□□□ 0.32
SRPRAP08240 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SRPRAP08240 PP12613-201ENST00000424958 2230 ntBASIC17.04■□□□□ 0.32
SRPRAP08240 WASH6P-202ENST00000359512 1437 ntBASIC17.04■□□□□ 0.32
SRPRAP08240 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SRPRAP08240 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC17.03■□□□□ 0.32
SRPRAP08240 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
SRPRAP08240 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC17.03■□□□□ 0.32
SRPRAP08240 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.03■□□□□ 0.32
SRPRAP08240 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SRPRAP08240 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SRPRAP08240 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SRPRAP08240 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SRPRAP08240 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SRPRAP08240 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SRPRAP08240 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SRPRAP08240 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SRPRAP08240 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC17.03■□□□□ 0.32
SRPRAP08240 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC17.03■□□□□ 0.32
SRPRAP08240 AC079140.1-201ENST00000508039 487 ntBASIC17.03■□□□□ 0.32
SRPRAP08240 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC17.03■□□□□ 0.32
SRPRAP08240 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
SRPRAP08240 AC243562.1-201ENST00000560672 389 ntBASIC17.03■□□□□ 0.32
SRPRAP08240 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC17.03■□□□□ 0.32
SRPRAP08240 INO80E-210ENST00000567705 880 ntTSL 3 BASIC17.03■□□□□ 0.32
SRPRAP08240 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
SRPRAP08240 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SRPRAP08240 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SRPRAP08240 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SRPRAP08240 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC17.03■□□□□ 0.32
SRPRAP08240 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SRPRAP08240 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SRPRAP08240 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms