Protein–RNA interactions for Protein: P03999

OPN1SW, Short-wave-sensitive opsin 1, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPN1SWP03999 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
OPN1SWP03999 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
OPN1SWP03999 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
OPN1SWP03999 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC15.89■□□□□ 0.13
OPN1SWP03999 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
OPN1SWP03999 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
OPN1SWP03999 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
OPN1SWP03999 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC15.89■□□□□ 0.13
OPN1SWP03999 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
OPN1SWP03999 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
OPN1SWP03999 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
OPN1SWP03999 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
OPN1SWP03999 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
OPN1SWP03999 PCDHA1-201ENST00000378133 2726 ntBASIC15.88■□□□□ 0.13
OPN1SWP03999 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
OPN1SWP03999 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC15.88■□□□□ 0.13
OPN1SWP03999 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
OPN1SWP03999 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
OPN1SWP03999 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC15.88■□□□□ 0.13
OPN1SWP03999 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
OPN1SWP03999 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
OPN1SWP03999 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
OPN1SWP03999 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
OPN1SWP03999 RCN1P2-201ENST00000398357 915 ntBASIC15.88■□□□□ 0.13
OPN1SWP03999 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC15.88■□□□□ 0.13
OPN1SWP03999 TSSC2-201ENST00000450217 709 ntBASIC15.88■□□□□ 0.13
OPN1SWP03999 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC15.88■□□□□ 0.13
OPN1SWP03999 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
OPN1SWP03999 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC15.88■□□□□ 0.13
OPN1SWP03999 FAM86EP-206ENST00000510506 987 ntBASIC15.88■□□□□ 0.13
OPN1SWP03999 KRT18P21-201ENST00000515767 1272 ntBASIC15.88■□□□□ 0.13
OPN1SWP03999 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC15.88■□□□□ 0.13
OPN1SWP03999 TPSP2-201ENST00000561760 610 ntBASIC15.88■□□□□ 0.13
OPN1SWP03999 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
OPN1SWP03999 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC15.88■□□□□ 0.13
OPN1SWP03999 Z69720.1-201ENST00000601483 472 ntBASIC15.88■□□□□ 0.13
OPN1SWP03999 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
OPN1SWP03999 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
OPN1SWP03999 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC15.88■□□□□ 0.13
OPN1SWP03999 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
OPN1SWP03999 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
OPN1SWP03999 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
OPN1SWP03999 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
OPN1SWP03999 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC15.88■□□□□ 0.13
OPN1SWP03999 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
OPN1SWP03999 NSUN5P1-202ENST00000421140 1535 ntBASIC15.88■□□□□ 0.13
OPN1SWP03999 NSUN5P2-203ENST00000457352 1529 ntBASIC15.88■□□□□ 0.13
OPN1SWP03999 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC15.88■□□□□ 0.13
OPN1SWP03999 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC15.88■□□□□ 0.13
OPN1SWP03999 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
OPN1SWP03999 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
OPN1SWP03999 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
OPN1SWP03999 PMPCAP1-201ENST00000508114 1576 ntBASIC15.87■□□□□ 0.13
OPN1SWP03999 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC15.87■□□□□ 0.13
OPN1SWP03999 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
OPN1SWP03999 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
OPN1SWP03999 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
OPN1SWP03999 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
OPN1SWP03999 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
OPN1SWP03999 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
OPN1SWP03999 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
OPN1SWP03999 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC15.87■□□□□ 0.13
OPN1SWP03999 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
OPN1SWP03999 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC15.87■□□□□ 0.13
OPN1SWP03999 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC15.87■□□□□ 0.13
OPN1SWP03999 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC15.87■□□□□ 0.13
OPN1SWP03999 CIB2-208ENST00000560618 804 ntTSL 2 BASIC15.87■□□□□ 0.13
OPN1SWP03999 ARL16-209ENST00000573715 763 ntTSL 3 BASIC15.87■□□□□ 0.13
OPN1SWP03999 ARL16-211ENST00000576135 694 ntTSL 3 BASIC15.87■□□□□ 0.13
OPN1SWP03999 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
OPN1SWP03999 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC15.87■□□□□ 0.13
OPN1SWP03999 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC15.87■□□□□ 0.13
OPN1SWP03999 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
OPN1SWP03999 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
OPN1SWP03999 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
OPN1SWP03999 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC15.87■□□□□ 0.13
OPN1SWP03999 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
OPN1SWP03999 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
OPN1SWP03999 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
OPN1SWP03999 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC15.87■□□□□ 0.13
OPN1SWP03999 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
OPN1SWP03999 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
OPN1SWP03999 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
OPN1SWP03999 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC15.87■□□□□ 0.13
OPN1SWP03999 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
OPN1SWP03999 GCK-209ENST00000616242 2260 ntTSL 5 BASIC15.87■□□□□ 0.13
OPN1SWP03999 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
OPN1SWP03999 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
OPN1SWP03999 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
OPN1SWP03999 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
OPN1SWP03999 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
OPN1SWP03999 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
OPN1SWP03999 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC15.86■□□□□ 0.13
OPN1SWP03999 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC15.86■□□□□ 0.13
OPN1SWP03999 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
OPN1SWP03999 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
OPN1SWP03999 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC15.86■□□□□ 0.13
OPN1SWP03999 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC15.86■□□□□ 0.13
OPN1SWP03999 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC15.86■□□□□ 0.13
OPN1SWP03999 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms