Protein–RNA interactions for Protein: P03979

TRGV3, T cell receptor gamma variable 3 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV3P03979 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
TRGV3P03979 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRGV3P03979 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRGV3P03979 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TRGV3P03979 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRGV3P03979 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC13.37□□□□□ -0.27
TRGV3P03979 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
TRGV3P03979 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRGV3P03979 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC13.37□□□□□ -0.27
TRGV3P03979 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TRGV3P03979 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TRGV3P03979 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
TRGV3P03979 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
TRGV3P03979 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRGV3P03979 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TRGV3P03979 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRGV3P03979 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRGV3P03979 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRGV3P03979 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRGV3P03979 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRGV3P03979 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TRGV3P03979 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC13.37□□□□□ -0.27
TRGV3P03979 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC13.37□□□□□ -0.27
TRGV3P03979 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRGV3P03979 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC13.37□□□□□ -0.27
TRGV3P03979 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRGV3P03979 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRGV3P03979 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC13.36□□□□□ -0.27
TRGV3P03979 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
TRGV3P03979 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
TRGV3P03979 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TRGV3P03979 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRGV3P03979 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRGV3P03979 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRGV3P03979 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRGV3P03979 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TRGV3P03979 AC243591.1-201ENST00000452967 1364 ntBASIC13.36□□□□□ -0.27
TRGV3P03979 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC13.36□□□□□ -0.27
TRGV3P03979 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
TRGV3P03979 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRGV3P03979 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRGV3P03979 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TRGV3P03979 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
TRGV3P03979 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC13.36□□□□□ -0.27
TRGV3P03979 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
TRGV3P03979 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRGV3P03979 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRGV3P03979 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC13.36□□□□□ -0.27
TRGV3P03979 AP002414.1-201ENST00000391405 1147 ntBASIC13.36□□□□□ -0.27
TRGV3P03979 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC13.36□□□□□ -0.27
TRGV3P03979 CENPM-204ENST00000402420 688 ntTSL 5 BASIC13.36□□□□□ -0.27
TRGV3P03979 KRT18P27-201ENST00000427733 1299 ntBASIC13.36□□□□□ -0.27
TRGV3P03979 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRGV3P03979 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC13.36□□□□□ -0.27
TRGV3P03979 RPS15P9-201ENST00000494093 319 ntBASIC13.36□□□□□ -0.27
TRGV3P03979 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC13.36□□□□□ -0.27
TRGV3P03979 ETFA-208ENST00000559602 792 ntTSL 3 BASIC13.36□□□□□ -0.27
TRGV3P03979 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC13.36□□□□□ -0.27
TRGV3P03979 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC13.36□□□□□ -0.27
TRGV3P03979 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC13.36□□□□□ -0.27
TRGV3P03979 LITAF-211ENST00000572255 516 ntTSL 4 BASIC13.36□□□□□ -0.27
TRGV3P03979 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
TRGV3P03979 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC13.36□□□□□ -0.27
TRGV3P03979 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRGV3P03979 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TRGV3P03979 MIR7706-201ENST00000613747 67 ntBASIC13.36□□□□□ -0.27
TRGV3P03979 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC13.36□□□□□ -0.27
TRGV3P03979 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC13.36□□□□□ -0.27
TRGV3P03979 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC13.36□□□□□ -0.27
TRGV3P03979 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRGV3P03979 NF2-208ENST00000403435 2568 ntTSL 5 BASIC13.36□□□□□ -0.27
TRGV3P03979 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
TRGV3P03979 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC13.36□□□□□ -0.27
TRGV3P03979 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC13.36□□□□□ -0.27
TRGV3P03979 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TRGV3P03979 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
TRGV3P03979 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TRGV3P03979 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRGV3P03979 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC13.36□□□□□ -0.27
TRGV3P03979 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
TRGV3P03979 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRGV3P03979 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRGV3P03979 HLA-A-201ENST00000376802 1334 ntBASIC13.36□□□□□ -0.27
TRGV3P03979 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRGV3P03979 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
TRGV3P03979 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
TRGV3P03979 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRGV3P03979 AP001094.4-201ENST00000579008 2176 ntBASIC13.35□□□□□ -0.27
TRGV3P03979 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC13.35□□□□□ -0.27
TRGV3P03979 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
TRGV3P03979 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC13.35□□□□□ -0.27
TRGV3P03979 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRGV3P03979 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRGV3P03979 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
TRGV3P03979 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
TRGV3P03979 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC13.35□□□□□ -0.27
TRGV3P03979 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC13.35□□□□□ -0.27
TRGV3P03979 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRGV3P03979 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC13.35□□□□□ -0.27
TRGV3P03979 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms