Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
IFNA1P01562 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
IFNA1P01562 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC13.46□□□□□ -0.25
IFNA1P01562 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
IFNA1P01562 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
IFNA1P01562 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
IFNA1P01562 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC13.46□□□□□ -0.25
IFNA1P01562 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
IFNA1P01562 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
IFNA1P01562 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
IFNA1P01562 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
IFNA1P01562 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
IFNA1P01562 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
IFNA1P01562 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
IFNA1P01562 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
IFNA1P01562 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
IFNA1P01562 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
IFNA1P01562 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
IFNA1P01562 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
IFNA1P01562 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
IFNA1P01562 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
IFNA1P01562 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
IFNA1P01562 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
IFNA1P01562 KRT18P29-201ENST00000397031 1267 ntBASIC13.46□□□□□ -0.25
IFNA1P01562 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC13.46□□□□□ -0.25
IFNA1P01562 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC13.46□□□□□ -0.25
IFNA1P01562 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC13.46□□□□□ -0.25
IFNA1P01562 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC13.46□□□□□ -0.25
IFNA1P01562 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
IFNA1P01562 WWOX-216ENST00000569818 525 ntBASIC13.46□□□□□ -0.25
IFNA1P01562 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
IFNA1P01562 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
IFNA1P01562 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC13.46□□□□□ -0.25
IFNA1P01562 AC022532.1-201ENST00000624563 1728 ntBASIC13.46□□□□□ -0.25
IFNA1P01562 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
IFNA1P01562 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
IFNA1P01562 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
IFNA1P01562 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
IFNA1P01562 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
IFNA1P01562 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC13.46□□□□□ -0.25
IFNA1P01562 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
IFNA1P01562 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC13.46□□□□□ -0.26
IFNA1P01562 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
IFNA1P01562 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
IFNA1P01562 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
IFNA1P01562 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
IFNA1P01562 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.26
IFNA1P01562 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
IFNA1P01562 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
IFNA1P01562 FAM45BP-202ENST00000592932 1624 ntBASIC13.46□□□□□ -0.26
IFNA1P01562 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
IFNA1P01562 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
IFNA1P01562 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC13.46□□□□□ -0.26
IFNA1P01562 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC13.46□□□□□ -0.26
IFNA1P01562 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC13.46□□□□□ -0.26
IFNA1P01562 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC13.45□□□□□ -0.26
IFNA1P01562 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
IFNA1P01562 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
IFNA1P01562 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
IFNA1P01562 STX3-203ENST00000529177 1571 ntTSL 2 BASIC13.45□□□□□ -0.26
IFNA1P01562 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
IFNA1P01562 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
IFNA1P01562 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
IFNA1P01562 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
IFNA1P01562 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
IFNA1P01562 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
IFNA1P01562 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC13.45□□□□□ -0.26
IFNA1P01562 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC13.45□□□□□ -0.26
IFNA1P01562 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
IFNA1P01562 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
IFNA1P01562 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
IFNA1P01562 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
IFNA1P01562 MYCLP1-201ENST00000372451 1075 ntBASIC13.45□□□□□ -0.26
IFNA1P01562 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
IFNA1P01562 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC13.45□□□□□ -0.26
IFNA1P01562 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC13.45□□□□□ -0.26
IFNA1P01562 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
IFNA1P01562 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
IFNA1P01562 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC13.45□□□□□ -0.26
IFNA1P01562 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
IFNA1P01562 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC13.45□□□□□ -0.26
IFNA1P01562 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC13.45□□□□□ -0.26
IFNA1P01562 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
IFNA1P01562 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
IFNA1P01562 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC13.45□□□□□ -0.26
IFNA1P01562 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
IFNA1P01562 CABP2-204ENST00000636477 941 ntTSL 5 BASIC13.45□□□□□ -0.26
IFNA1P01562 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
IFNA1P01562 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
IFNA1P01562 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
IFNA1P01562 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC13.45□□□□□ -0.26
IFNA1P01562 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
IFNA1P01562 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
IFNA1P01562 AMT-250ENST00000637682 1823 ntTSL 5 BASIC13.45□□□□□ -0.26
IFNA1P01562 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC13.45□□□□□ -0.26
IFNA1P01562 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
IFNA1P01562 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
IFNA1P01562 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
IFNA1P01562 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
IFNA1P01562 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms