Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
NKX2-2O95096 BSG-214ENST00000614867 960 ntTSL 3 BASIC15.63■□□□□ 0.09
NKX2-2O95096 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NKX2-2O95096 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
NKX2-2O95096 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
NKX2-2O95096 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
NKX2-2O95096 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
NKX2-2O95096 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
NKX2-2O95096 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
NKX2-2O95096 AL353732.1-201ENST00000569618 1459 ntBASIC15.63■□□□□ 0.09
NKX2-2O95096 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
NKX2-2O95096 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NKX2-2O95096 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC15.63■□□□□ 0.09
NKX2-2O95096 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
NKX2-2O95096 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
NKX2-2O95096 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC15.63■□□□□ 0.09
NKX2-2O95096 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC15.63■□□□□ 0.09
NKX2-2O95096 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NKX2-2O95096 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NKX2-2O95096 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NKX2-2O95096 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC15.62■□□□□ 0.09
NKX2-2O95096 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC15.62■□□□□ 0.09
NKX2-2O95096 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
NKX2-2O95096 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
NKX2-2O95096 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC15.62■□□□□ 0.09
NKX2-2O95096 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NKX2-2O95096 CA12-203ENST00000422263 2556 ntTSL 2 BASIC15.62■□□□□ 0.09
NKX2-2O95096 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC15.62■□□□□ 0.09
NKX2-2O95096 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
NKX2-2O95096 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC15.62■□□□□ 0.09
NKX2-2O95096 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NKX2-2O95096 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NKX2-2O95096 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC15.62■□□□□ 0.09
NKX2-2O95096 PRSS29P-201ENST00000440800 595 ntBASIC15.62■□□□□ 0.09
NKX2-2O95096 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
NKX2-2O95096 IGHV3-22-201ENST00000520721 359 ntBASIC15.62■□□□□ 0.09
NKX2-2O95096 PENK-208ENST00000523051 772 ntTSL 5 BASIC15.62■□□□□ 0.09
NKX2-2O95096 UNC93B6-202ENST00000528242 690 ntBASIC15.62■□□□□ 0.09
NKX2-2O95096 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC15.62■□□□□ 0.09
NKX2-2O95096 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC15.62■□□□□ 0.09
NKX2-2O95096 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC15.62■□□□□ 0.09
NKX2-2O95096 AC010654.1-201ENST00000615722 808 ntBASIC15.62■□□□□ 0.09
NKX2-2O95096 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC15.62■□□□□ 0.09
NKX2-2O95096 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NKX2-2O95096 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
NKX2-2O95096 CYP51A1P2-201ENST00000419457 1499 ntBASIC15.62■□□□□ 0.09
NKX2-2O95096 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC15.62■□□□□ 0.09
NKX2-2O95096 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC15.62■□□□□ 0.09
NKX2-2O95096 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC15.62■□□□□ 0.09
NKX2-2O95096 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
NKX2-2O95096 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NKX2-2O95096 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC15.62■□□□□ 0.09
NKX2-2O95096 AC131009.4-201ENST00000624048 1740 ntBASIC15.62■□□□□ 0.09
NKX2-2O95096 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NKX2-2O95096 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NKX2-2O95096 HARS-204ENST00000438307 1789 ntTSL 2 BASIC15.62■□□□□ 0.09
NKX2-2O95096 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
NKX2-2O95096 AC006538.1-201ENST00000567905 1585 ntBASIC15.62■□□□□ 0.09
NKX2-2O95096 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
NKX2-2O95096 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC15.62■□□□□ 0.09
NKX2-2O95096 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
NKX2-2O95096 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
NKX2-2O95096 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC15.61■□□□□ 0.09
NKX2-2O95096 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
NKX2-2O95096 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC15.61■□□□□ 0.09
NKX2-2O95096 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
NKX2-2O95096 SLC22A20-204ENST00000530038 1673 ntBASIC15.61■□□□□ 0.09
NKX2-2O95096 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC15.61■□□□□ 0.09
NKX2-2O95096 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NKX2-2O95096 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NKX2-2O95096 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC15.61■□□□□ 0.09
NKX2-2O95096 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC15.61■□□□□ 0.09
NKX2-2O95096 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
NKX2-2O95096 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
NKX2-2O95096 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
NKX2-2O95096 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC15.61■□□□□ 0.09
NKX2-2O95096 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
NKX2-2O95096 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
NKX2-2O95096 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC15.61■□□□□ 0.09
NKX2-2O95096 PMS2P1-201ENST00000431037 1228 ntBASIC15.61■□□□□ 0.09
NKX2-2O95096 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
NKX2-2O95096 AC108751.1-201ENST00000490852 363 ntBASIC15.61■□□□□ 0.09
NKX2-2O95096 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC15.61■□□□□ 0.09
NKX2-2O95096 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
NKX2-2O95096 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC15.61■□□□□ 0.09
NKX2-2O95096 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC15.61■□□□□ 0.09
NKX2-2O95096 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC15.61■□□□□ 0.09
NKX2-2O95096 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC15.61■□□□□ 0.09
NKX2-2O95096 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC15.61■□□□□ 0.09
NKX2-2O95096 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
NKX2-2O95096 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
NKX2-2O95096 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
NKX2-2O95096 PCDHA14-201ENST00000506751 2298 ntBASIC15.61■□□□□ 0.09
NKX2-2O95096 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC15.61■□□□□ 0.09
NKX2-2O95096 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC15.61■□□□□ 0.09
NKX2-2O95096 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
NKX2-2O95096 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NKX2-2O95096 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NKX2-2O95096 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
NKX2-2O95096 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms