Protein–RNA interactions for Protein: O76009

KRT33A, Keratin, type I cuticular Ha3-I, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT33AO76009 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
KRT33AO76009 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
KRT33AO76009 AMT-250ENST00000637682 1823 ntTSL 5 BASIC15.45■□□□□ 0.06
KRT33AO76009 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC15.45■□□□□ 0.06
KRT33AO76009 PMPCAP1-201ENST00000508114 1576 ntBASIC15.45■□□□□ 0.06
KRT33AO76009 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC15.45■□□□□ 0.06
KRT33AO76009 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
KRT33AO76009 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
KRT33AO76009 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
KRT33AO76009 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
KRT33AO76009 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
KRT33AO76009 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
KRT33AO76009 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
KRT33AO76009 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
KRT33AO76009 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC15.44■□□□□ 0.06
KRT33AO76009 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC15.44■□□□□ 0.06
KRT33AO76009 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
KRT33AO76009 PCDHA14-201ENST00000506751 2298 ntBASIC15.44■□□□□ 0.06
KRT33AO76009 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
KRT33AO76009 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
KRT33AO76009 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
KRT33AO76009 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
KRT33AO76009 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC15.44■□□□□ 0.06
KRT33AO76009 HIST2H3DP1-201ENST00000401004 416 ntBASIC15.44■□□□□ 0.06
KRT33AO76009 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC15.44■□□□□ 0.06
KRT33AO76009 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
KRT33AO76009 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC15.44■□□□□ 0.06
KRT33AO76009 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC15.44■□□□□ 0.06
KRT33AO76009 EMBP1-201ENST00000458200 901 ntBASIC15.44■□□□□ 0.06
KRT33AO76009 UNC93B7-201ENST00000509439 705 ntBASIC15.44■□□□□ 0.06
KRT33AO76009 AC106795.1-205ENST00000512851 1056 ntBASIC15.44■□□□□ 0.06
KRT33AO76009 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC15.44■□□□□ 0.06
KRT33AO76009 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC15.44■□□□□ 0.06
KRT33AO76009 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC15.44■□□□□ 0.06
KRT33AO76009 AP000867.4-201ENST00000641616 219 ntBASIC15.44■□□□□ 0.06
KRT33AO76009 AC046185.3-201ENST00000623228 1824 ntBASIC15.44■□□□□ 0.06
KRT33AO76009 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
KRT33AO76009 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
KRT33AO76009 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC15.44■□□□□ 0.06
KRT33AO76009 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
KRT33AO76009 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
KRT33AO76009 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC15.44■□□□□ 0.06
KRT33AO76009 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
KRT33AO76009 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
KRT33AO76009 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
KRT33AO76009 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
KRT33AO76009 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
KRT33AO76009 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
KRT33AO76009 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
KRT33AO76009 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
KRT33AO76009 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
KRT33AO76009 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
KRT33AO76009 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC15.44■□□□□ 0.06
KRT33AO76009 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
KRT33AO76009 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
KRT33AO76009 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
KRT33AO76009 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
KRT33AO76009 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
KRT33AO76009 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
KRT33AO76009 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
KRT33AO76009 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
KRT33AO76009 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
KRT33AO76009 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
KRT33AO76009 LYSMD4-203ENST00000378904 2122 ntBASIC15.43■□□□□ 0.06
KRT33AO76009 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
KRT33AO76009 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
KRT33AO76009 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC15.43■□□□□ 0.06
KRT33AO76009 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
KRT33AO76009 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
KRT33AO76009 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC15.43■□□□□ 0.06
KRT33AO76009 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
KRT33AO76009 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC15.43■□□□□ 0.06
KRT33AO76009 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
KRT33AO76009 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
KRT33AO76009 FAAHP1-202ENST00000446499 1238 ntBASIC15.43■□□□□ 0.06
KRT33AO76009 MSRA-206ENST00000521209 814 ntTSL 3 BASIC15.43■□□□□ 0.06
KRT33AO76009 BMF-207ENST00000559701 630 ntTSL 3 BASIC15.43■□□□□ 0.06
KRT33AO76009 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC15.43■□□□□ 0.06
KRT33AO76009 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC15.43■□□□□ 0.06
KRT33AO76009 AL355877.3-201ENST00000622820 899 ntBASIC15.43■□□□□ 0.06
KRT33AO76009 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
KRT33AO76009 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
KRT33AO76009 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC15.43■□□□□ 0.06
KRT33AO76009 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
KRT33AO76009 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
KRT33AO76009 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC15.43■□□□□ 0.06
KRT33AO76009 PCDH8P1-201ENST00000428983 2773 ntBASIC15.43■□□□□ 0.06
KRT33AO76009 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
KRT33AO76009 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
KRT33AO76009 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
KRT33AO76009 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
KRT33AO76009 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC15.43■□□□□ 0.06
KRT33AO76009 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
KRT33AO76009 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
KRT33AO76009 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
KRT33AO76009 AC132938.5-201ENST00000624980 1813 ntBASIC15.43■□□□□ 0.06
KRT33AO76009 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC15.43■□□□□ 0.06
KRT33AO76009 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC15.43■□□□□ 0.06
KRT33AO76009 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC15.43■□□□□ 0.06
KRT33AO76009 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC15.43■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms