Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC18.45■□□□□ 0.54
CCDC66A2RUB6 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
CCDC66A2RUB6 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC18.45■□□□□ 0.54
CCDC66A2RUB6 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
CCDC66A2RUB6 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC66A2RUB6 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC66A2RUB6 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC18.44■□□□□ 0.54
CCDC66A2RUB6 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC66A2RUB6 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC66A2RUB6 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
CCDC66A2RUB6 TERF1P1-201ENST00000311003 1181 ntBASIC18.44■□□□□ 0.54
CCDC66A2RUB6 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC18.44■□□□□ 0.54
CCDC66A2RUB6 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC66A2RUB6 AC002558.1-201ENST00000488906 803 ntBASIC18.44■□□□□ 0.54
CCDC66A2RUB6 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC66A2RUB6 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC66A2RUB6 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC18.44■□□□□ 0.54
CCDC66A2RUB6 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC66A2RUB6 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
CCDC66A2RUB6 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC66A2RUB6 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC66A2RUB6 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
CCDC66A2RUB6 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
CCDC66A2RUB6 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC66A2RUB6 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
CCDC66A2RUB6 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC66A2RUB6 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC66A2RUB6 AC097374.2-201ENST00000618617 1306 ntBASIC18.44■□□□□ 0.54
CCDC66A2RUB6 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC66A2RUB6 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC66A2RUB6 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
CCDC66A2RUB6 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CCDC66A2RUB6 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CCDC66A2RUB6 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CCDC66A2RUB6 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC18.43■□□□□ 0.54
CCDC66A2RUB6 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC18.43■□□□□ 0.54
CCDC66A2RUB6 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
CCDC66A2RUB6 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CCDC66A2RUB6 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC18.43■□□□□ 0.54
CCDC66A2RUB6 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CCDC66A2RUB6 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC18.43■□□□□ 0.54
CCDC66A2RUB6 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CCDC66A2RUB6 COPE-203ENST00000351079 907 ntTSL 2 BASIC18.43■□□□□ 0.54
CCDC66A2RUB6 HBZP1-201ENST00000354915 429 ntBASIC18.43■□□□□ 0.54
CCDC66A2RUB6 HOMER2P1-201ENST00000455653 964 ntBASIC18.43■□□□□ 0.54
CCDC66A2RUB6 FGF14-AS2-201ENST00000606448 1074 ntBASIC18.43■□□□□ 0.54
CCDC66A2RUB6 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
CCDC66A2RUB6 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
CCDC66A2RUB6 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
CCDC66A2RUB6 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CCDC66A2RUB6 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CCDC66A2RUB6 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
CCDC66A2RUB6 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC18.43■□□□□ 0.54
CCDC66A2RUB6 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC18.43■□□□□ 0.54
CCDC66A2RUB6 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CCDC66A2RUB6 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC18.43■□□□□ 0.54
CCDC66A2RUB6 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC18.43■□□□□ 0.54
CCDC66A2RUB6 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CCDC66A2RUB6 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC66A2RUB6 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
CCDC66A2RUB6 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC18.42■□□□□ 0.54
CCDC66A2RUB6 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC66A2RUB6 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC66A2RUB6 PC-208ENST00000529047 1607 ntTSL 3 BASIC18.42■□□□□ 0.54
CCDC66A2RUB6 ADM-208ENST00000534464 1640 ntTSL 2 BASIC18.42■□□□□ 0.54
CCDC66A2RUB6 AC073508.3-201ENST00000619697 1419 ntBASIC18.42■□□□□ 0.54
CCDC66A2RUB6 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC66A2RUB6 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC66A2RUB6 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC18.42■□□□□ 0.54
CCDC66A2RUB6 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
CCDC66A2RUB6 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC66A2RUB6 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC66A2RUB6 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
CCDC66A2RUB6 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC66A2RUB6 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC66A2RUB6 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
CCDC66A2RUB6 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC18.42■□□□□ 0.54
CCDC66A2RUB6 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC66A2RUB6 AC117947.1-201ENST00000427448 529 ntBASIC18.42■□□□□ 0.54
CCDC66A2RUB6 CNP-204ENST00000472031 1019 ntTSL 2 BASIC18.42■□□□□ 0.54
CCDC66A2RUB6 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC18.42■□□□□ 0.54
CCDC66A2RUB6 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC66A2RUB6 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC18.42■□□□□ 0.54
CCDC66A2RUB6 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC18.42■□□□□ 0.54
CCDC66A2RUB6 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC66A2RUB6 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC18.42■□□□□ 0.54
CCDC66A2RUB6 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC18.42■□□□□ 0.54
CCDC66A2RUB6 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC18.42■□□□□ 0.54
CCDC66A2RUB6 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC66A2RUB6 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC66A2RUB6 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC66A2RUB6 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC66A2RUB6 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC66A2RUB6 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC66A2RUB6 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
CCDC66A2RUB6 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC18.42■□□□□ 0.54
CCDC66A2RUB6 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC66A2RUB6 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC66A2RUB6 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC66A2RUB6 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms