Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TCRBV3S1A0A5B6 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
TCRBV3S1A0A5B6 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
TCRBV3S1A0A5B6 AC006449.6-201ENST00000612330 2296 ntBASIC15.89■□□□□ 0.13
TCRBV3S1A0A5B6 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
TCRBV3S1A0A5B6 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TCRBV3S1A0A5B6 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TCRBV3S1A0A5B6 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
TCRBV3S1A0A5B6 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
TCRBV3S1A0A5B6 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
TCRBV3S1A0A5B6 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TCRBV3S1A0A5B6 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC15.89■□□□□ 0.13
TCRBV3S1A0A5B6 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TCRBV3S1A0A5B6 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TCRBV3S1A0A5B6 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TCRBV3S1A0A5B6 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC15.89■□□□□ 0.13
TCRBV3S1A0A5B6 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC15.89■□□□□ 0.13
TCRBV3S1A0A5B6 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
TCRBV3S1A0A5B6 FAM8A6P-201ENST00000407496 1135 ntBASIC15.89■□□□□ 0.13
TCRBV3S1A0A5B6 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC15.89■□□□□ 0.13
TCRBV3S1A0A5B6 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TCRBV3S1A0A5B6 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TCRBV3S1A0A5B6 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
TCRBV3S1A0A5B6 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC15.89■□□□□ 0.13
TCRBV3S1A0A5B6 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
TCRBV3S1A0A5B6 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
TCRBV3S1A0A5B6 AL390719.2-201ENST00000606993 987 ntBASIC15.89■□□□□ 0.13
TCRBV3S1A0A5B6 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
TCRBV3S1A0A5B6 AL138966.2-201ENST00000621997 464 ntBASIC15.89■□□□□ 0.13
TCRBV3S1A0A5B6 AL023973.1-201ENST00000624619 620 ntBASIC15.89■□□□□ 0.13
TCRBV3S1A0A5B6 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
TCRBV3S1A0A5B6 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TCRBV3S1A0A5B6 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TCRBV3S1A0A5B6 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TCRBV3S1A0A5B6 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
TCRBV3S1A0A5B6 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
TCRBV3S1A0A5B6 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC15.89■□□□□ 0.13
TCRBV3S1A0A5B6 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
TCRBV3S1A0A5B6 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC15.89■□□□□ 0.13
TCRBV3S1A0A5B6 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
TCRBV3S1A0A5B6 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
TCRBV3S1A0A5B6 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TCRBV3S1A0A5B6 AC006058.4-201ENST00000624016 1670 ntBASIC15.89■□□□□ 0.13
TCRBV3S1A0A5B6 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC15.89■□□□□ 0.13
TCRBV3S1A0A5B6 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
TCRBV3S1A0A5B6 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TCRBV3S1A0A5B6 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TCRBV3S1A0A5B6 AL021920.2-201ENST00000624828 1351 ntBASIC15.88■□□□□ 0.13
TCRBV3S1A0A5B6 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TCRBV3S1A0A5B6 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC15.88■□□□□ 0.13
TCRBV3S1A0A5B6 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
TCRBV3S1A0A5B6 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
TCRBV3S1A0A5B6 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
TCRBV3S1A0A5B6 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
TCRBV3S1A0A5B6 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TCRBV3S1A0A5B6 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TCRBV3S1A0A5B6 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TCRBV3S1A0A5B6 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC15.88■□□□□ 0.13
TCRBV3S1A0A5B6 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC15.88■□□□□ 0.13
TCRBV3S1A0A5B6 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
TCRBV3S1A0A5B6 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
TCRBV3S1A0A5B6 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC15.88■□□□□ 0.13
TCRBV3S1A0A5B6 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC15.88■□□□□ 0.13
TCRBV3S1A0A5B6 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC15.88■□□□□ 0.13
TCRBV3S1A0A5B6 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TCRBV3S1A0A5B6 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC15.88■□□□□ 0.13
TCRBV3S1A0A5B6 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC15.88■□□□□ 0.13
TCRBV3S1A0A5B6 AC013467.2-201ENST00000605472 835 ntBASIC15.88■□□□□ 0.13
TCRBV3S1A0A5B6 VPS72-207ENST00000640458 689 ntTSL 5 BASIC15.88■□□□□ 0.13
TCRBV3S1A0A5B6 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TCRBV3S1A0A5B6 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC15.88■□□□□ 0.13
TCRBV3S1A0A5B6 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC15.88■□□□□ 0.13
TCRBV3S1A0A5B6 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
TCRBV3S1A0A5B6 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC15.88■□□□□ 0.13
TCRBV3S1A0A5B6 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TCRBV3S1A0A5B6 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC15.88■□□□□ 0.13
TCRBV3S1A0A5B6 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC15.88■□□□□ 0.13
TCRBV3S1A0A5B6 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC15.88■□□□□ 0.13
TCRBV3S1A0A5B6 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC15.88■□□□□ 0.13
TCRBV3S1A0A5B6 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TCRBV3S1A0A5B6 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
TCRBV3S1A0A5B6 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TCRBV3S1A0A5B6 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC15.87■□□□□ 0.13
TCRBV3S1A0A5B6 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TCRBV3S1A0A5B6 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TCRBV3S1A0A5B6 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TCRBV3S1A0A5B6 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC15.87■□□□□ 0.13
TCRBV3S1A0A5B6 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC15.87■□□□□ 0.13
TCRBV3S1A0A5B6 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
TCRBV3S1A0A5B6 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC15.87■□□□□ 0.13
TCRBV3S1A0A5B6 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC15.87■□□□□ 0.13
TCRBV3S1A0A5B6 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
TCRBV3S1A0A5B6 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TCRBV3S1A0A5B6 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
TCRBV3S1A0A5B6 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
TCRBV3S1A0A5B6 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC15.87■□□□□ 0.13
TCRBV3S1A0A5B6 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC15.87■□□□□ 0.13
TCRBV3S1A0A5B6 STK24-203ENST00000397517 4578 ntTSL 2 BASIC15.87■□□□□ 0.13
TCRBV3S1A0A5B6 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TCRBV3S1A0A5B6 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms