Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
PCDHGB3Q9Y5G1 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
PCDHGB3Q9Y5G1 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
PCDHGB3Q9Y5G1 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
PCDHGB3Q9Y5G1 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC22.66■■□□□ 1.22
PCDHGB3Q9Y5G1 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC22.66■■□□□ 1.22
PCDHGB3Q9Y5G1 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC22.66■■□□□ 1.22
PCDHGB3Q9Y5G1 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC22.66■■□□□ 1.22
PCDHGB3Q9Y5G1 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
PCDHGB3Q9Y5G1 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
PCDHGB3Q9Y5G1 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
PCDHGB3Q9Y5G1 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
PCDHGB3Q9Y5G1 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
PCDHGB3Q9Y5G1 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
PCDHGB3Q9Y5G1 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC22.65■■□□□ 1.22
PCDHGB3Q9Y5G1 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
PCDHGB3Q9Y5G1 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
PCDHGB3Q9Y5G1 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
PCDHGB3Q9Y5G1 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.22
PCDHGB3Q9Y5G1 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
PCDHGB3Q9Y5G1 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
PCDHGB3Q9Y5G1 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
PCDHGB3Q9Y5G1 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
PCDHGB3Q9Y5G1 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
PCDHGB3Q9Y5G1 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
PCDHGB3Q9Y5G1 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
PCDHGB3Q9Y5G1 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
PCDHGB3Q9Y5G1 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
PCDHGB3Q9Y5G1 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
PCDHGB3Q9Y5G1 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
PCDHGB3Q9Y5G1 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
PCDHGB3Q9Y5G1 AC010501.1-201ENST00000606270 1962 ntBASIC22.6■■□□□ 1.21
PCDHGB3Q9Y5G1 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC22.6■■□□□ 1.21
PCDHGB3Q9Y5G1 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
PCDHGB3Q9Y5G1 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
PCDHGB3Q9Y5G1 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC22.59■■□□□ 1.21
PCDHGB3Q9Y5G1 AC092296.2-201ENST00000589470 999 ntBASIC22.59■■□□□ 1.21
PCDHGB3Q9Y5G1 ERN1-208ENST00000606895 2068 ntBASIC22.59■■□□□ 1.21
PCDHGB3Q9Y5G1 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
PCDHGB3Q9Y5G1 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
PCDHGB3Q9Y5G1 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.21
PCDHGB3Q9Y5G1 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC22.58■■□□□ 1.21
PCDHGB3Q9Y5G1 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PCDHGB3Q9Y5G1 ECEL1P2-201ENST00000461596 1295 ntBASIC22.57■■□□□ 1.2
PCDHGB3Q9Y5G1 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
PCDHGB3Q9Y5G1 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC22.57■■□□□ 1.2
PCDHGB3Q9Y5G1 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PCDHGB3Q9Y5G1 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PCDHGB3Q9Y5G1 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PCDHGB3Q9Y5G1 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
PCDHGB3Q9Y5G1 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
PCDHGB3Q9Y5G1 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PCDHGB3Q9Y5G1 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PCDHGB3Q9Y5G1 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC22.56■■□□□ 1.2
PCDHGB3Q9Y5G1 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
PCDHGB3Q9Y5G1 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
PCDHGB3Q9Y5G1 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
PCDHGB3Q9Y5G1 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
PCDHGB3Q9Y5G1 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
PCDHGB3Q9Y5G1 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC22.55■■□□□ 1.2
PCDHGB3Q9Y5G1 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC22.55■■□□□ 1.2
PCDHGB3Q9Y5G1 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC22.55■■□□□ 1.2
PCDHGB3Q9Y5G1 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PCDHGB3Q9Y5G1 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
PCDHGB3Q9Y5G1 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PCDHGB3Q9Y5G1 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
PCDHGB3Q9Y5G1 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC22.54■■□□□ 1.2
PCDHGB3Q9Y5G1 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PCDHGB3Q9Y5G1 NTF6A-201ENST00000591175 560 ntBASIC22.54■■□□□ 1.2
PCDHGB3Q9Y5G1 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
PCDHGB3Q9Y5G1 PFN2-211ENST00000489155 636 ntTSL 4 BASIC22.53■■□□□ 1.2
PCDHGB3Q9Y5G1 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC22.53■■□□□ 1.2
PCDHGB3Q9Y5G1 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
PCDHGB3Q9Y5G1 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
PCDHGB3Q9Y5G1 AC142381.3-201ENST00000568208 1670 ntBASIC22.52■■□□□ 1.2
PCDHGB3Q9Y5G1 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
PCDHGB3Q9Y5G1 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC22.52■■□□□ 1.2
PCDHGB3Q9Y5G1 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
PCDHGB3Q9Y5G1 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
PCDHGB3Q9Y5G1 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC22.52■■□□□ 1.2
PCDHGB3Q9Y5G1 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC22.52■■□□□ 1.2
PCDHGB3Q9Y5G1 REST-210ENST00000638187 1334 ntTSL 5 BASIC22.52■■□□□ 1.2
PCDHGB3Q9Y5G1 AL157400.5-201ENST00000507624 621 ntBASIC22.51■■□□□ 1.19
PCDHGB3Q9Y5G1 MIR3960-201ENST00000583311 91 ntBASIC22.51■■□□□ 1.19
PCDHGB3Q9Y5G1 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC22.51■■□□□ 1.19
PCDHGB3Q9Y5G1 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC22.51■■□□□ 1.19
PCDHGB3Q9Y5G1 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PCDHGB3Q9Y5G1 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
PCDHGB3Q9Y5G1 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC22.51■■□□□ 1.19
PCDHGB3Q9Y5G1 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PCDHGB3Q9Y5G1 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC22.51■■□□□ 1.19
PCDHGB3Q9Y5G1 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PCDHGB3Q9Y5G1 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PCDHGB3Q9Y5G1 SMPD5-203ENST00000639008 1464 ntBASIC22.5■■□□□ 1.19
PCDHGB3Q9Y5G1 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PCDHGB3Q9Y5G1 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
PCDHGB3Q9Y5G1 AC025884.2-201ENST00000553429 711 ntBASIC22.5■■□□□ 1.19
PCDHGB3Q9Y5G1 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PCDHGB3Q9Y5G1 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC22.5■■□□□ 1.19
PCDHGB3Q9Y5G1 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC22.5■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 13.9 ms