Protein–RNA interactions for Protein: Q9Y3C5

RNF11, RING finger protein 11, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF11Q9Y3C5 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
RNF11Q9Y3C5 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC23.4■■□□□ 1.34
RNF11Q9Y3C5 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC23.4■■□□□ 1.34
RNF11Q9Y3C5 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
RNF11Q9Y3C5 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
RNF11Q9Y3C5 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC23.4■■□□□ 1.34
RNF11Q9Y3C5 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC23.39■■□□□ 1.34
RNF11Q9Y3C5 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
RNF11Q9Y3C5 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
RNF11Q9Y3C5 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC23.39■■□□□ 1.33
RNF11Q9Y3C5 AC096887.2-201ENST00000623443 1957 ntBASIC23.39■■□□□ 1.33
RNF11Q9Y3C5 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
RNF11Q9Y3C5 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
RNF11Q9Y3C5 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC23.38■■□□□ 1.33
RNF11Q9Y3C5 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
RNF11Q9Y3C5 TPT1-202ENST00000379055 948 ntTSL 2 BASIC23.38■■□□□ 1.33
RNF11Q9Y3C5 MOB2-207ENST00000614710 705 ntTSL 5 BASIC23.38■■□□□ 1.33
RNF11Q9Y3C5 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
RNF11Q9Y3C5 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC23.38■■□□□ 1.33
RNF11Q9Y3C5 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
RNF11Q9Y3C5 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC23.38■■□□□ 1.33
RNF11Q9Y3C5 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
RNF11Q9Y3C5 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC23.37■■□□□ 1.33
RNF11Q9Y3C5 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC23.37■■□□□ 1.33
RNF11Q9Y3C5 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
RNF11Q9Y3C5 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
RNF11Q9Y3C5 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC23.36■■□□□ 1.33
RNF11Q9Y3C5 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC23.36■■□□□ 1.33
RNF11Q9Y3C5 CEBPA-AS1-201ENST00000592982 2198 ntBASIC23.36■■□□□ 1.33
RNF11Q9Y3C5 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC23.36■■□□□ 1.33
RNF11Q9Y3C5 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
RNF11Q9Y3C5 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC23.36■■□□□ 1.33
RNF11Q9Y3C5 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
RNF11Q9Y3C5 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
RNF11Q9Y3C5 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
RNF11Q9Y3C5 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
RNF11Q9Y3C5 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
RNF11Q9Y3C5 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
RNF11Q9Y3C5 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC23.34■■□□□ 1.33
RNF11Q9Y3C5 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC23.34■■□□□ 1.33
RNF11Q9Y3C5 SRP68-213ENST00000629930 165 ntTSL 5 BASIC23.34■■□□□ 1.33
RNF11Q9Y3C5 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC23.34■■□□□ 1.33
RNF11Q9Y3C5 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC23.34■■□□□ 1.33
RNF11Q9Y3C5 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
RNF11Q9Y3C5 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
RNF11Q9Y3C5 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
RNF11Q9Y3C5 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC23.33■■□□□ 1.33
RNF11Q9Y3C5 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.33
RNF11Q9Y3C5 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
RNF11Q9Y3C5 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
RNF11Q9Y3C5 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC23.33■■□□□ 1.32
RNF11Q9Y3C5 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
RNF11Q9Y3C5 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
RNF11Q9Y3C5 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
RNF11Q9Y3C5 AC025884.2-201ENST00000553429 711 ntBASIC23.32■■□□□ 1.32
RNF11Q9Y3C5 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC23.32■■□□□ 1.32
RNF11Q9Y3C5 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
RNF11Q9Y3C5 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
RNF11Q9Y3C5 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
RNF11Q9Y3C5 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC23.31■■□□□ 1.32
RNF11Q9Y3C5 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC23.31■■□□□ 1.32
RNF11Q9Y3C5 THRA-202ENST00000394121 2260 ntTSL 2 BASIC23.3■■□□□ 1.32
RNF11Q9Y3C5 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
RNF11Q9Y3C5 AC092296.2-201ENST00000589470 999 ntBASIC23.3■■□□□ 1.32
RNF11Q9Y3C5 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
RNF11Q9Y3C5 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC23.3■■□□□ 1.32
RNF11Q9Y3C5 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC23.29■■□□□ 1.32
RNF11Q9Y3C5 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
RNF11Q9Y3C5 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC23.29■■□□□ 1.32
RNF11Q9Y3C5 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
RNF11Q9Y3C5 PFN2-211ENST00000489155 636 ntTSL 4 BASIC23.29■■□□□ 1.32
RNF11Q9Y3C5 MBP-237ENST00000579129 1052 ntTSL 5 BASIC23.29■■□□□ 1.32
RNF11Q9Y3C5 AC022413.1-201ENST00000624602 984 ntBASIC23.29■■□□□ 1.32
RNF11Q9Y3C5 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC23.28■■□□□ 1.32
RNF11Q9Y3C5 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
RNF11Q9Y3C5 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC23.28■■□□□ 1.32
RNF11Q9Y3C5 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
RNF11Q9Y3C5 SMPD5-203ENST00000639008 1464 ntBASIC23.28■■□□□ 1.32
RNF11Q9Y3C5 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC23.28■■□□□ 1.32
RNF11Q9Y3C5 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
RNF11Q9Y3C5 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
RNF11Q9Y3C5 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
RNF11Q9Y3C5 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
RNF11Q9Y3C5 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
RNF11Q9Y3C5 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC23.27■■□□□ 1.32
RNF11Q9Y3C5 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC23.26■■□□□ 1.31
RNF11Q9Y3C5 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
RNF11Q9Y3C5 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
RNF11Q9Y3C5 MIR4449-201ENST00000578365 66 ntBASIC23.26■■□□□ 1.31
RNF11Q9Y3C5 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
RNF11Q9Y3C5 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC23.26■■□□□ 1.31
RNF11Q9Y3C5 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
RNF11Q9Y3C5 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
RNF11Q9Y3C5 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
RNF11Q9Y3C5 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
RNF11Q9Y3C5 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC23.25■■□□□ 1.31
RNF11Q9Y3C5 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC23.25■■□□□ 1.31
RNF11Q9Y3C5 CEP120-209ENST00000515110 606 ntTSL 3 BASIC23.25■■□□□ 1.31
RNF11Q9Y3C5 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
RNF11Q9Y3C5 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC23.24■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms