Protein–RNA interactions for Protein: Q9Y2I6

NINL, Ninein-like protein, humanhuman

Predictions only

Length 1,382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NINLQ9Y2I6 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC33.22■■■□□ 2.91
NINLQ9Y2I6 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC33.22■■■□□ 2.91
NINLQ9Y2I6 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC33.22■■■□□ 2.91
NINLQ9Y2I6 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC33.21■■■□□ 2.91
NINLQ9Y2I6 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC33.21■■■□□ 2.91
NINLQ9Y2I6 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC33.21■■■□□ 2.91
NINLQ9Y2I6 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC33.21■■■□□ 2.91
NINLQ9Y2I6 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC33.2■■■□□ 2.91
NINLQ9Y2I6 AC103724.3-201ENST00000564481 992 ntBASIC33.2■■■□□ 2.9
NINLQ9Y2I6 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC33.2■■■□□ 2.9
NINLQ9Y2I6 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC33.19■■■□□ 2.9
NINLQ9Y2I6 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC33.19■■■□□ 2.9
NINLQ9Y2I6 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC33.18■■■□□ 2.9
NINLQ9Y2I6 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC33.18■■■□□ 2.9
NINLQ9Y2I6 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC33.18■■■□□ 2.9
NINLQ9Y2I6 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC33.18■■■□□ 2.9
NINLQ9Y2I6 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC33.17■■■□□ 2.9
NINLQ9Y2I6 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC33.17■■■□□ 2.9
NINLQ9Y2I6 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC33.17■■■□□ 2.9
NINLQ9Y2I6 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC33.17■■■□□ 2.9
NINLQ9Y2I6 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC33.17■■■□□ 2.9
NINLQ9Y2I6 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC33.16■■■□□ 2.9
NINLQ9Y2I6 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC33.16■■■□□ 2.9
NINLQ9Y2I6 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC33.16■■■□□ 2.9
NINLQ9Y2I6 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC33.16■■■□□ 2.9
NINLQ9Y2I6 AC009299.2-201ENST00000482477 511 ntBASIC33.16■■■□□ 2.9
NINLQ9Y2I6 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC33.16■■■□□ 2.9
NINLQ9Y2I6 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC33.16■■■□□ 2.9
NINLQ9Y2I6 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC33.16■■■□□ 2.9
NINLQ9Y2I6 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC33.15■■■□□ 2.9
NINLQ9Y2I6 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC33.15■■■□□ 2.9
NINLQ9Y2I6 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC33.15■■■□□ 2.9
NINLQ9Y2I6 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC33.15■■■□□ 2.9
NINLQ9Y2I6 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC33.15■■■□□ 2.9
NINLQ9Y2I6 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC33.15■■■□□ 2.9
NINLQ9Y2I6 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC33.15■■■□□ 2.9
NINLQ9Y2I6 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC33.14■■■□□ 2.9
NINLQ9Y2I6 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC33.14■■■□□ 2.9
NINLQ9Y2I6 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC33.14■■■□□ 2.9
NINLQ9Y2I6 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC33.14■■■□□ 2.9
NINLQ9Y2I6 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC33.14■■■□□ 2.9
NINLQ9Y2I6 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC33.13■■■□□ 2.89
NINLQ9Y2I6 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC33.13■■■□□ 2.89
NINLQ9Y2I6 AC022616.5-201ENST00000518796 181 ntBASIC33.13■■■□□ 2.89
NINLQ9Y2I6 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC33.13■■■□□ 2.89
NINLQ9Y2I6 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC33.13■■■□□ 2.89
NINLQ9Y2I6 AC131212.1-201ENST00000613771 668 ntBASIC33.13■■■□□ 2.89
NINLQ9Y2I6 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC33.13■■■□□ 2.89
NINLQ9Y2I6 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC33.13■■■□□ 2.89
NINLQ9Y2I6 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC33.13■■■□□ 2.89
NINLQ9Y2I6 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC33.13■■■□□ 2.89
NINLQ9Y2I6 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC33.13■■■□□ 2.89
NINLQ9Y2I6 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC33.13■■■□□ 2.89
NINLQ9Y2I6 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC33.12■■■□□ 2.89
NINLQ9Y2I6 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC33.12■■■□□ 2.89
NINLQ9Y2I6 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC33.12■■■□□ 2.89
NINLQ9Y2I6 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC33.12■■■□□ 2.89
NINLQ9Y2I6 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC33.11■■■□□ 2.89
NINLQ9Y2I6 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC33.11■■■□□ 2.89
NINLQ9Y2I6 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC33.11■■■□□ 2.89
NINLQ9Y2I6 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC33.11■■■□□ 2.89
NINLQ9Y2I6 AL031848.2-201ENST00000607670 837 ntBASIC33.11■■■□□ 2.89
NINLQ9Y2I6 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC33.11■■■□□ 2.89
NINLQ9Y2I6 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC33.1■■■□□ 2.89
NINLQ9Y2I6 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC33.1■■■□□ 2.89
NINLQ9Y2I6 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC33.1■■■□□ 2.89
NINLQ9Y2I6 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC33.1■■■□□ 2.89
NINLQ9Y2I6 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC33.09■■■□□ 2.89
NINLQ9Y2I6 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC33.09■■■□□ 2.89
NINLQ9Y2I6 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC33.08■■■□□ 2.89
NINLQ9Y2I6 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC33.08■■■□□ 2.89
NINLQ9Y2I6 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC33.08■■■□□ 2.89
NINLQ9Y2I6 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC33.07■■■□□ 2.88
NINLQ9Y2I6 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC33.07■■■□□ 2.88
NINLQ9Y2I6 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC33.07■■■□□ 2.88
NINLQ9Y2I6 PRTG-204ENST00000561292 833 ntTSL 3 BASIC33.07■■■□□ 2.88
NINLQ9Y2I6 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC33.07■■■□□ 2.88
NINLQ9Y2I6 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC33.07■■■□□ 2.88
NINLQ9Y2I6 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC33.06■■■□□ 2.88
NINLQ9Y2I6 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC33.06■■■□□ 2.88
NINLQ9Y2I6 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC33.05■■■□□ 2.88
NINLQ9Y2I6 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC33.05■■■□□ 2.88
NINLQ9Y2I6 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC33.05■■■□□ 2.88
NINLQ9Y2I6 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC33.05■■■□□ 2.88
NINLQ9Y2I6 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC33.05■■■□□ 2.88
NINLQ9Y2I6 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC33.04■■■□□ 2.88
NINLQ9Y2I6 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC33.04■■■□□ 2.88
NINLQ9Y2I6 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC33.04■■■□□ 2.88
NINLQ9Y2I6 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC33.03■■■□□ 2.88
NINLQ9Y2I6 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC33.03■■■□□ 2.88
NINLQ9Y2I6 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC33.03■■■□□ 2.88
NINLQ9Y2I6 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC33.03■■■□□ 2.88
NINLQ9Y2I6 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC33.03■■■□□ 2.88
NINLQ9Y2I6 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC33.02■■■□□ 2.88
NINLQ9Y2I6 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC33.02■■■□□ 2.88
NINLQ9Y2I6 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC33.02■■■□□ 2.88
NINLQ9Y2I6 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC33.02■■■□□ 2.88
NINLQ9Y2I6 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC33.01■■■□□ 2.88
NINLQ9Y2I6 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC33.01■■■□□ 2.87
NINLQ9Y2I6 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC33■■■□□ 2.87
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms