Protein–RNA interactions for Protein: Q9NYA1

SPHK1, Sphingosine kinase 1, humanhuman

Predictions only

Length 384 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1Q9NYA1 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
SPHK1Q9NYA1 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
SPHK1Q9NYA1 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
SPHK1Q9NYA1 ERN1-208ENST00000606895 2068 ntBASIC23.25■■□□□ 1.31
SPHK1Q9NYA1 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
SPHK1Q9NYA1 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC23.25■■□□□ 1.31
SPHK1Q9NYA1 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC23.25■■□□□ 1.31
SPHK1Q9NYA1 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
SPHK1Q9NYA1 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC23.24■■□□□ 1.31
SPHK1Q9NYA1 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
SPHK1Q9NYA1 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC23.24■■□□□ 1.31
SPHK1Q9NYA1 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC23.24■■□□□ 1.31
SPHK1Q9NYA1 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC23.24■■□□□ 1.31
SPHK1Q9NYA1 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
SPHK1Q9NYA1 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC23.23■■□□□ 1.31
SPHK1Q9NYA1 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC23.23■■□□□ 1.31
SPHK1Q9NYA1 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
SPHK1Q9NYA1 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
SPHK1Q9NYA1 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
SPHK1Q9NYA1 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC23.23■■□□□ 1.31
SPHK1Q9NYA1 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
SPHK1Q9NYA1 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC23.23■■□□□ 1.31
SPHK1Q9NYA1 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
SPHK1Q9NYA1 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
SPHK1Q9NYA1 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
SPHK1Q9NYA1 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
SPHK1Q9NYA1 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC23.22■■□□□ 1.31
SPHK1Q9NYA1 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
SPHK1Q9NYA1 IDNK-203ENST00000405990 629 ntTSL 2 BASIC23.22■■□□□ 1.31
SPHK1Q9NYA1 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC23.22■■□□□ 1.31
SPHK1Q9NYA1 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC23.22■■□□□ 1.31
SPHK1Q9NYA1 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
SPHK1Q9NYA1 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
SPHK1Q9NYA1 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
SPHK1Q9NYA1 AC092803.2-201ENST00000564287 1899 ntBASIC23.21■■□□□ 1.31
SPHK1Q9NYA1 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC23.21■■□□□ 1.31
SPHK1Q9NYA1 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
SPHK1Q9NYA1 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC23.2■■□□□ 1.3
SPHK1Q9NYA1 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SPHK1Q9NYA1 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC23.2■■□□□ 1.3
SPHK1Q9NYA1 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SPHK1Q9NYA1 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SPHK1Q9NYA1 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC23.2■■□□□ 1.3
SPHK1Q9NYA1 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SPHK1Q9NYA1 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC23.2■■□□□ 1.3
SPHK1Q9NYA1 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC23.2■■□□□ 1.3
SPHK1Q9NYA1 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC23.2■■□□□ 1.3
SPHK1Q9NYA1 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC23.2■■□□□ 1.3
SPHK1Q9NYA1 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
SPHK1Q9NYA1 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SPHK1Q9NYA1 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
SPHK1Q9NYA1 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
SPHK1Q9NYA1 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC23.19■■□□□ 1.3
SPHK1Q9NYA1 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC23.19■■□□□ 1.3
SPHK1Q9NYA1 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
SPHK1Q9NYA1 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
SPHK1Q9NYA1 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
SPHK1Q9NYA1 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC23.19■■□□□ 1.3
SPHK1Q9NYA1 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
SPHK1Q9NYA1 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC23.18■■□□□ 1.3
SPHK1Q9NYA1 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
SPHK1Q9NYA1 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
SPHK1Q9NYA1 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SPHK1Q9NYA1 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
SPHK1Q9NYA1 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
SPHK1Q9NYA1 RPS2P7-201ENST00000447334 885 ntBASIC23.17■■□□□ 1.3
SPHK1Q9NYA1 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC23.17■■□□□ 1.3
SPHK1Q9NYA1 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SPHK1Q9NYA1 BHLHE23-202ENST00000612929 1109 ntBASIC23.17■■□□□ 1.3
SPHK1Q9NYA1 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SPHK1Q9NYA1 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC23.16■■□□□ 1.3
SPHK1Q9NYA1 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SPHK1Q9NYA1 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
SPHK1Q9NYA1 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
SPHK1Q9NYA1 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC23.16■■□□□ 1.3
SPHK1Q9NYA1 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
SPHK1Q9NYA1 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
SPHK1Q9NYA1 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SPHK1Q9NYA1 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SPHK1Q9NYA1 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SPHK1Q9NYA1 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
SPHK1Q9NYA1 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SPHK1Q9NYA1 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC23.15■■□□□ 1.3
SPHK1Q9NYA1 AC139795.1-202ENST00000500444 432 ntBASIC23.15■■□□□ 1.3
SPHK1Q9NYA1 AC087393.1-201ENST00000582896 145 ntBASIC23.15■■□□□ 1.3
SPHK1Q9NYA1 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC23.15■■□□□ 1.3
SPHK1Q9NYA1 AC091060.1-201ENST00000623524 1766 ntBASIC23.14■■□□□ 1.3
SPHK1Q9NYA1 AC096887.2-201ENST00000623443 1957 ntBASIC23.14■■□□□ 1.3
SPHK1Q9NYA1 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
SPHK1Q9NYA1 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.3
SPHK1Q9NYA1 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
SPHK1Q9NYA1 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
SPHK1Q9NYA1 AC010980.1-201ENST00000587192 1142 ntBASIC23.14■■□□□ 1.29
SPHK1Q9NYA1 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC23.14■■□□□ 1.29
SPHK1Q9NYA1 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC23.13■■□□□ 1.29
SPHK1Q9NYA1 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
SPHK1Q9NYA1 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC23.13■■□□□ 1.29
SPHK1Q9NYA1 HYI-210ENST00000486909 905 ntTSL 5 BASIC23.13■■□□□ 1.29
SPHK1Q9NYA1 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
SPHK1Q9NYA1 AC010501.1-201ENST00000606270 1962 ntBASIC23.12■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms