Protein–RNA interactions for Protein: Q9NRQ5

SMCO4, Single-pass membrane and coiled-coil domain-containing protein 4, humanhuman

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4Q9NRQ5 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SMCO4Q9NRQ5 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC18.94■□□□□ 0.62
SMCO4Q9NRQ5 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SMCO4Q9NRQ5 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SMCO4Q9NRQ5 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SMCO4Q9NRQ5 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SMCO4Q9NRQ5 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC18.93■□□□□ 0.62
SMCO4Q9NRQ5 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SMCO4Q9NRQ5 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
SMCO4Q9NRQ5 SLC25A24-204ENST00000569674 2357 ntBASIC18.92■□□□□ 0.62
SMCO4Q9NRQ5 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SMCO4Q9NRQ5 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SMCO4Q9NRQ5 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SMCO4Q9NRQ5 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SMCO4Q9NRQ5 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SMCO4Q9NRQ5 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
SMCO4Q9NRQ5 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SMCO4Q9NRQ5 AP004609.3-201ENST00000610705 1884 ntBASIC18.92■□□□□ 0.62
SMCO4Q9NRQ5 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SMCO4Q9NRQ5 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SMCO4Q9NRQ5 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC18.91■□□□□ 0.62
SMCO4Q9NRQ5 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SMCO4Q9NRQ5 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
SMCO4Q9NRQ5 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
SMCO4Q9NRQ5 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
SMCO4Q9NRQ5 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SMCO4Q9NRQ5 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
SMCO4Q9NRQ5 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SMCO4Q9NRQ5 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
SMCO4Q9NRQ5 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SMCO4Q9NRQ5 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
SMCO4Q9NRQ5 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC18.9■□□□□ 0.62
SMCO4Q9NRQ5 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC18.9■□□□□ 0.62
SMCO4Q9NRQ5 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SMCO4Q9NRQ5 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
SMCO4Q9NRQ5 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SMCO4Q9NRQ5 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SMCO4Q9NRQ5 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SMCO4Q9NRQ5 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SMCO4Q9NRQ5 AC018358.1-201ENST00000631079 1402 ntBASIC18.89■□□□□ 0.61
SMCO4Q9NRQ5 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SMCO4Q9NRQ5 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
SMCO4Q9NRQ5 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SMCO4Q9NRQ5 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SMCO4Q9NRQ5 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
SMCO4Q9NRQ5 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
SMCO4Q9NRQ5 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SMCO4Q9NRQ5 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC18.88■□□□□ 0.61
SMCO4Q9NRQ5 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC18.88■□□□□ 0.61
SMCO4Q9NRQ5 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
SMCO4Q9NRQ5 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
SMCO4Q9NRQ5 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SMCO4Q9NRQ5 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SMCO4Q9NRQ5 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC18.88■□□□□ 0.61
SMCO4Q9NRQ5 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC18.88■□□□□ 0.61
SMCO4Q9NRQ5 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
SMCO4Q9NRQ5 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
SMCO4Q9NRQ5 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SMCO4Q9NRQ5 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SMCO4Q9NRQ5 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SMCO4Q9NRQ5 AC096887.2-201ENST00000623443 1957 ntBASIC18.87■□□□□ 0.61
SMCO4Q9NRQ5 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SMCO4Q9NRQ5 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC18.87■□□□□ 0.61
SMCO4Q9NRQ5 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SMCO4Q9NRQ5 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
SMCO4Q9NRQ5 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
SMCO4Q9NRQ5 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SMCO4Q9NRQ5 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SMCO4Q9NRQ5 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SMCO4Q9NRQ5 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SMCO4Q9NRQ5 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SMCO4Q9NRQ5 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
SMCO4Q9NRQ5 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
SMCO4Q9NRQ5 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
SMCO4Q9NRQ5 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SMCO4Q9NRQ5 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SMCO4Q9NRQ5 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SMCO4Q9NRQ5 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SMCO4Q9NRQ5 STK25-234ENST00000535007 2459 ntTSL 2 BASIC18.85■□□□□ 0.61
SMCO4Q9NRQ5 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SMCO4Q9NRQ5 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SMCO4Q9NRQ5 EED-207ENST00000528180 1745 ntTSL 5 BASIC18.85■□□□□ 0.61
SMCO4Q9NRQ5 C1orf229-201ENST00000623686 2258 ntBASIC18.85■□□□□ 0.61
SMCO4Q9NRQ5 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC18.85■□□□□ 0.61
SMCO4Q9NRQ5 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SMCO4Q9NRQ5 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SMCO4Q9NRQ5 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC18.84■□□□□ 0.61
SMCO4Q9NRQ5 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SMCO4Q9NRQ5 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC18.84■□□□□ 0.61
SMCO4Q9NRQ5 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SMCO4Q9NRQ5 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SMCO4Q9NRQ5 AC010501.1-201ENST00000606270 1962 ntBASIC18.84■□□□□ 0.61
SMCO4Q9NRQ5 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC18.84■□□□□ 0.61
SMCO4Q9NRQ5 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SMCO4Q9NRQ5 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SMCO4Q9NRQ5 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SMCO4Q9NRQ5 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SMCO4Q9NRQ5 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SMCO4Q9NRQ5 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
SMCO4Q9NRQ5 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms