Protein–RNA interactions for Protein: Q9N2K0

HERV-H_2q24.3 provirus ancestral Env polyprotein, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9N2K0 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC20.09■□□□□ 0.81
Q9N2K0 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Q9N2K0 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Q9N2K0 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC20.08■□□□□ 0.81
Q9N2K0 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Q9N2K0 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Q9N2K0 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.81
Q9N2K0 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Q9N2K0 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Q9N2K0 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
Q9N2K0 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Q9N2K0 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Q9N2K0 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Q9N2K0 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Q9N2K0 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Q9N2K0 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC20.07■□□□□ 0.8
Q9N2K0 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Q9N2K0 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC20.07■□□□□ 0.8
Q9N2K0 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Q9N2K0 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Q9N2K0 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Q9N2K0 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Q9N2K0 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Q9N2K0 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Q9N2K0 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Q9N2K0 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Q9N2K0 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC20.05■□□□□ 0.8
Q9N2K0 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Q9N2K0 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Q9N2K0 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Q9N2K0 AL139125.2-201ENST00000623134 1869 ntBASIC20.05■□□□□ 0.8
Q9N2K0 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Q9N2K0 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC20.05■□□□□ 0.8
Q9N2K0 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Q9N2K0 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Q9N2K0 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
Q9N2K0 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Q9N2K0 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Q9N2K0 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Q9N2K0 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC20.03■□□□□ 0.8
Q9N2K0 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC20.03■□□□□ 0.8
Q9N2K0 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Q9N2K0 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Q9N2K0 MIR3648-2-201ENST00000581792 180 ntBASIC20.02■□□□□ 0.8
Q9N2K0 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC20.02■□□□□ 0.8
Q9N2K0 MIR3648-1-201ENST00000615959 180 ntBASIC20.02■□□□□ 0.8
Q9N2K0 GDI1-215ENST00000630693 786 ntTSL 4 BASIC20.02■□□□□ 0.8
Q9N2K0 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Q9N2K0 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Q9N2K0 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Q9N2K0 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
Q9N2K0 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Q9N2K0 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Q9N2K0 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
Q9N2K0 ABHD17AP4-201ENST00000411545 909 ntBASIC20.01■□□□□ 0.79
Q9N2K0 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Q9N2K0 PREB-202ENST00000406567 1910 ntTSL 5 BASIC20■□□□□ 0.79
Q9N2K0 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Q9N2K0 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Q9N2K0 AC097639.1-201ENST00000565519 1891 ntBASIC20■□□□□ 0.79
Q9N2K0 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Q9N2K0 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Q9N2K0 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC20■□□□□ 0.79
Q9N2K0 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Q9N2K0 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC20■□□□□ 0.79
Q9N2K0 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC19.99■□□□□ 0.79
Q9N2K0 MACF1-219ENST00000484793 834 ntTSL 2 BASIC19.99■□□□□ 0.79
Q9N2K0 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Q9N2K0 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Q9N2K0 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC19.99■□□□□ 0.79
Q9N2K0 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC19.99■□□□□ 0.79
Q9N2K0 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC19.99■□□□□ 0.79
Q9N2K0 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Q9N2K0 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC19.98■□□□□ 0.79
Q9N2K0 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC19.98■□□□□ 0.79
Q9N2K0 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Q9N2K0 METRNL-202ENST00000570778 967 ntTSL 5 BASIC19.98■□□□□ 0.79
Q9N2K0 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Q9N2K0 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Q9N2K0 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
Q9N2K0 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Q9N2K0 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Q9N2K0 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Q9N2K0 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Q9N2K0 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Q9N2K0 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Q9N2K0 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Q9N2K0 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Q9N2K0 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC19.96■□□□□ 0.79
Q9N2K0 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC19.96■□□□□ 0.79
Q9N2K0 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Q9N2K0 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Q9N2K0 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Q9N2K0 AC016575.1-201ENST00000607026 382 ntBASIC19.95■□□□□ 0.78
Q9N2K0 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Q9N2K0 THRA-202ENST00000394121 2260 ntTSL 2 BASIC19.95■□□□□ 0.78
Q9N2K0 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Q9N2K0 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Q9N2K0 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Q9N2K0 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms