Protein–RNA interactions for Protein: Q9H2W1

MS4A6A, Membrane-spanning 4-domains subfamily A member 6A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A6AQ9H2W1 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MS4A6AQ9H2W1 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
MS4A6AQ9H2W1 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
MS4A6AQ9H2W1 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
MS4A6AQ9H2W1 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
MS4A6AQ9H2W1 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
MS4A6AQ9H2W1 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
MS4A6AQ9H2W1 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
MS4A6AQ9H2W1 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
MS4A6AQ9H2W1 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
MS4A6AQ9H2W1 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC18.36■□□□□ 0.53
MS4A6AQ9H2W1 SMPD5-203ENST00000639008 1464 ntBASIC18.36■□□□□ 0.53
MS4A6AQ9H2W1 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
MS4A6AQ9H2W1 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
MS4A6AQ9H2W1 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
MS4A6AQ9H2W1 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
MS4A6AQ9H2W1 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC18.35■□□□□ 0.53
MS4A6AQ9H2W1 AC091060.1-201ENST00000623524 1766 ntBASIC18.35■□□□□ 0.53
MS4A6AQ9H2W1 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
MS4A6AQ9H2W1 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
MS4A6AQ9H2W1 REST-210ENST00000638187 1334 ntTSL 5 BASIC18.35■□□□□ 0.53
MS4A6AQ9H2W1 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
MS4A6AQ9H2W1 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
MS4A6AQ9H2W1 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC18.35■□□□□ 0.53
MS4A6AQ9H2W1 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
MS4A6AQ9H2W1 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
MS4A6AQ9H2W1 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
MS4A6AQ9H2W1 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC18.34■□□□□ 0.53
MS4A6AQ9H2W1 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
MS4A6AQ9H2W1 AC025884.2-201ENST00000553429 711 ntBASIC18.34■□□□□ 0.53
MS4A6AQ9H2W1 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
MS4A6AQ9H2W1 AC092803.2-201ENST00000564287 1899 ntBASIC18.34■□□□□ 0.53
MS4A6AQ9H2W1 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
MS4A6AQ9H2W1 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC18.34■□□□□ 0.53
MS4A6AQ9H2W1 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC18.33■□□□□ 0.53
MS4A6AQ9H2W1 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
MS4A6AQ9H2W1 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
MS4A6AQ9H2W1 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
MS4A6AQ9H2W1 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
MS4A6AQ9H2W1 PFN2-211ENST00000489155 636 ntTSL 4 BASIC18.33■□□□□ 0.52
MS4A6AQ9H2W1 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC18.33■□□□□ 0.52
MS4A6AQ9H2W1 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
MS4A6AQ9H2W1 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC18.33■□□□□ 0.52
MS4A6AQ9H2W1 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC18.33■□□□□ 0.52
MS4A6AQ9H2W1 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC18.33■□□□□ 0.52
MS4A6AQ9H2W1 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC18.33■□□□□ 0.52
MS4A6AQ9H2W1 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
MS4A6AQ9H2W1 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC18.32■□□□□ 0.52
MS4A6AQ9H2W1 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
MS4A6AQ9H2W1 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
MS4A6AQ9H2W1 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
MS4A6AQ9H2W1 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
MS4A6AQ9H2W1 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC18.31■□□□□ 0.52
MS4A6AQ9H2W1 MIR3960-201ENST00000583311 91 ntBASIC18.31■□□□□ 0.52
MS4A6AQ9H2W1 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
MS4A6AQ9H2W1 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC18.31■□□□□ 0.52
MS4A6AQ9H2W1 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
MS4A6AQ9H2W1 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
MS4A6AQ9H2W1 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC18.3■□□□□ 0.52
MS4A6AQ9H2W1 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC18.3■□□□□ 0.52
MS4A6AQ9H2W1 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
MS4A6AQ9H2W1 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
MS4A6AQ9H2W1 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
MS4A6AQ9H2W1 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
MS4A6AQ9H2W1 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
MS4A6AQ9H2W1 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC18.3■□□□□ 0.52
MS4A6AQ9H2W1 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC18.29■□□□□ 0.52
MS4A6AQ9H2W1 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
MS4A6AQ9H2W1 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
MS4A6AQ9H2W1 AC145676.1-201ENST00000514988 2004 ntBASIC18.29■□□□□ 0.52
MS4A6AQ9H2W1 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
MS4A6AQ9H2W1 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC18.29■□□□□ 0.52
MS4A6AQ9H2W1 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
MS4A6AQ9H2W1 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
MS4A6AQ9H2W1 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
MS4A6AQ9H2W1 RNF126P1-201ENST00000567452 1320 ntBASIC18.28■□□□□ 0.52
MS4A6AQ9H2W1 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC18.28■□□□□ 0.52
MS4A6AQ9H2W1 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC18.28■□□□□ 0.52
MS4A6AQ9H2W1 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC18.28■□□□□ 0.52
MS4A6AQ9H2W1 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
MS4A6AQ9H2W1 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
MS4A6AQ9H2W1 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
MS4A6AQ9H2W1 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
MS4A6AQ9H2W1 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC18.27■□□□□ 0.52
MS4A6AQ9H2W1 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC18.27■□□□□ 0.52
MS4A6AQ9H2W1 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC18.27■□□□□ 0.52
MS4A6AQ9H2W1 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
MS4A6AQ9H2W1 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
MS4A6AQ9H2W1 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
MS4A6AQ9H2W1 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
MS4A6AQ9H2W1 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
MS4A6AQ9H2W1 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
MS4A6AQ9H2W1 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
MS4A6AQ9H2W1 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC18.26■□□□□ 0.51
MS4A6AQ9H2W1 AC007029.1-201ENST00000604183 313 ntBASIC18.26■□□□□ 0.51
MS4A6AQ9H2W1 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
MS4A6AQ9H2W1 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
MS4A6AQ9H2W1 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
MS4A6AQ9H2W1 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
MS4A6AQ9H2W1 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms