Protein–RNA interactions for Protein: Q9H267

VPS33B, Vacuolar protein sorting-associated protein 33B, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33BQ9H267 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC29.48■■■□□ 2.31
VPS33BQ9H267 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
VPS33BQ9H267 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC29.48■■■□□ 2.31
VPS33BQ9H267 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC29.47■■■□□ 2.31
VPS33BQ9H267 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC29.47■■■□□ 2.31
VPS33BQ9H267 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC29.47■■■□□ 2.31
VPS33BQ9H267 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC29.47■■■□□ 2.31
VPS33BQ9H267 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC29.47■■■□□ 2.31
VPS33BQ9H267 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC29.47■■■□□ 2.31
VPS33BQ9H267 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC29.47■■■□□ 2.31
VPS33BQ9H267 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
VPS33BQ9H267 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC29.46■■■□□ 2.31
VPS33BQ9H267 TSPY9P-201ENST00000440215 945 ntBASIC29.46■■■□□ 2.31
VPS33BQ9H267 TSPY11P-201ENST00000442607 1045 ntBASIC29.46■■■□□ 2.31
VPS33BQ9H267 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC29.46■■■□□ 2.31
VPS33BQ9H267 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
VPS33BQ9H267 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC29.45■■■□□ 2.31
VPS33BQ9H267 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC29.45■■■□□ 2.31
VPS33BQ9H267 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC29.45■■■□□ 2.31
VPS33BQ9H267 RPP21-222ENST00000433076 577 ntTSL 2 BASIC29.45■■■□□ 2.31
VPS33BQ9H267 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.3
VPS33BQ9H267 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.3
VPS33BQ9H267 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
VPS33BQ9H267 AL449106.1-201ENST00000608517 1980 ntBASIC29.44■■■□□ 2.3
VPS33BQ9H267 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC29.44■■■□□ 2.3
VPS33BQ9H267 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC29.43■■■□□ 2.3
VPS33BQ9H267 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC29.43■■■□□ 2.3
VPS33BQ9H267 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC29.43■■■□□ 2.3
VPS33BQ9H267 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
VPS33BQ9H267 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC29.42■■■□□ 2.3
VPS33BQ9H267 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC29.42■■■□□ 2.3
VPS33BQ9H267 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC29.42■■■□□ 2.3
VPS33BQ9H267 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
VPS33BQ9H267 AC131281.2-201ENST00000520478 145 ntBASIC29.42■■■□□ 2.3
VPS33BQ9H267 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC29.42■■■□□ 2.3
VPS33BQ9H267 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
VPS33BQ9H267 NALT1-201ENST00000429224 738 ntTSL 5 BASIC29.41■■■□□ 2.3
VPS33BQ9H267 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC29.41■■■□□ 2.3
VPS33BQ9H267 RALB-208ENST00000631312 311 ntTSL 5 BASIC29.41■■■□□ 2.3
VPS33BQ9H267 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
VPS33BQ9H267 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC29.41■■■□□ 2.3
VPS33BQ9H267 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
VPS33BQ9H267 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
VPS33BQ9H267 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
VPS33BQ9H267 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC29.4■■■□□ 2.3
VPS33BQ9H267 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC29.39■■■□□ 2.3
VPS33BQ9H267 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
VPS33BQ9H267 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC29.39■■■□□ 2.3
VPS33BQ9H267 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC29.39■■■□□ 2.3
VPS33BQ9H267 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC29.39■■■□□ 2.3
VPS33BQ9H267 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC29.39■■■□□ 2.3
VPS33BQ9H267 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC29.39■■■□□ 2.3
VPS33BQ9H267 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC29.39■■■□□ 2.3
VPS33BQ9H267 SRR-208ENST00000576848 588 ntTSL 4 BASIC29.39■■■□□ 2.3
VPS33BQ9H267 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC29.39■■■□□ 2.3
VPS33BQ9H267 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
VPS33BQ9H267 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.29
VPS33BQ9H267 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC29.39■■■□□ 2.29
VPS33BQ9H267 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC29.38■■■□□ 2.29
VPS33BQ9H267 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
VPS33BQ9H267 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
VPS33BQ9H267 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC29.38■■■□□ 2.29
VPS33BQ9H267 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC29.38■■■□□ 2.29
VPS33BQ9H267 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
VPS33BQ9H267 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC29.37■■■□□ 2.29
VPS33BQ9H267 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC29.37■■■□□ 2.29
VPS33BQ9H267 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC29.37■■■□□ 2.29
VPS33BQ9H267 TRIR-202ENST00000588213 841 ntTSL 3 BASIC29.37■■■□□ 2.29
VPS33BQ9H267 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC29.36■■■□□ 2.29
VPS33BQ9H267 MIR3621-201ENST00000580529 85 ntBASIC29.36■■■□□ 2.29
VPS33BQ9H267 MIR4281-201ENST00000580852 62 ntBASIC29.36■■■□□ 2.29
VPS33BQ9H267 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
VPS33BQ9H267 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
VPS33BQ9H267 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC29.35■■■□□ 2.29
VPS33BQ9H267 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC29.35■■■□□ 2.29
VPS33BQ9H267 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
VPS33BQ9H267 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC29.35■■■□□ 2.29
VPS33BQ9H267 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC29.34■■■□□ 2.29
VPS33BQ9H267 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
VPS33BQ9H267 AL117332.1-201ENST00000622628 974 ntBASIC29.34■■■□□ 2.29
VPS33BQ9H267 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC29.34■■■□□ 2.29
VPS33BQ9H267 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC29.34■■■□□ 2.29
VPS33BQ9H267 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC29.33■■■□□ 2.29
VPS33BQ9H267 MIR6724-1-201ENST00000616420 92 ntBASIC29.33■■■□□ 2.29
VPS33BQ9H267 MIR6724-2-201ENST00000616483 92 ntBASIC29.33■■■□□ 2.29
VPS33BQ9H267 MIR6724-4-201ENST00000617390 92 ntBASIC29.33■■■□□ 2.29
VPS33BQ9H267 MIR6724-3-201ENST00000622482 92 ntBASIC29.33■■■□□ 2.29
VPS33BQ9H267 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC29.33■■■□□ 2.29
VPS33BQ9H267 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC29.33■■■□□ 2.29
VPS33BQ9H267 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
VPS33BQ9H267 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
VPS33BQ9H267 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC29.33■■■□□ 2.29
VPS33BQ9H267 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC29.33■■■□□ 2.29
VPS33BQ9H267 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC29.32■■■□□ 2.28
VPS33BQ9H267 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC29.32■■■□□ 2.28
VPS33BQ9H267 AL136116.3-201ENST00000402907 1138 ntBASIC29.32■■■□□ 2.28
VPS33BQ9H267 AC010997.5-201ENST00000609182 354 ntBASIC29.32■■■□□ 2.28
VPS33BQ9H267 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
VPS33BQ9H267 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
VPS33BQ9H267 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC29.31■■■□□ 2.28
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms