Protein–RNA interactions for Protein: Q99884

SLC6A7, Sodium-dependent proline transporter, humanhuman

Predictions only

Length 636 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A7Q99884 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SLC6A7Q99884 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
SLC6A7Q99884 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SLC6A7Q99884 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
SLC6A7Q99884 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
SLC6A7Q99884 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC20.7■□□□□ 0.91
SLC6A7Q99884 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
SLC6A7Q99884 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.7■□□□□ 0.9
SLC6A7Q99884 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
SLC6A7Q99884 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SLC6A7Q99884 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SLC6A7Q99884 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
SLC6A7Q99884 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
SLC6A7Q99884 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
SLC6A7Q99884 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC20.7■□□□□ 0.9
SLC6A7Q99884 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SLC6A7Q99884 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SLC6A7Q99884 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SLC6A7Q99884 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SLC6A7Q99884 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SLC6A7Q99884 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SLC6A7Q99884 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC20.69■□□□□ 0.9
SLC6A7Q99884 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC20.69■□□□□ 0.9
SLC6A7Q99884 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.69■□□□□ 0.9
SLC6A7Q99884 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
SLC6A7Q99884 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SLC6A7Q99884 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
SLC6A7Q99884 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SLC6A7Q99884 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SLC6A7Q99884 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SLC6A7Q99884 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SLC6A7Q99884 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SLC6A7Q99884 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
SLC6A7Q99884 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SLC6A7Q99884 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC20.67■□□□□ 0.9
SLC6A7Q99884 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SLC6A7Q99884 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SLC6A7Q99884 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
SLC6A7Q99884 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SLC6A7Q99884 AC012354.3-201ENST00000623734 483 ntBASIC20.67■□□□□ 0.9
SLC6A7Q99884 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SLC6A7Q99884 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SLC6A7Q99884 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SLC6A7Q99884 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SLC6A7Q99884 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SLC6A7Q99884 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SLC6A7Q99884 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
SLC6A7Q99884 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SLC6A7Q99884 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SLC6A7Q99884 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SLC6A7Q99884 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC20.65■□□□□ 0.9
SLC6A7Q99884 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
SLC6A7Q99884 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SLC6A7Q99884 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SLC6A7Q99884 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC20.65■□□□□ 0.9
SLC6A7Q99884 AC142381.3-201ENST00000568208 1670 ntBASIC20.64■□□□□ 0.9
SLC6A7Q99884 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
SLC6A7Q99884 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
SLC6A7Q99884 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
SLC6A7Q99884 AC148477.6-201ENST00000623746 465 ntBASIC20.64■□□□□ 0.89
SLC6A7Q99884 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC20.64■□□□□ 0.89
SLC6A7Q99884 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SLC6A7Q99884 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SLC6A7Q99884 RARA-203ENST00000394086 2008 ntTSL 2 BASIC20.63■□□□□ 0.89
SLC6A7Q99884 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
SLC6A7Q99884 AC060814.1-201ENST00000554326 538 ntBASIC20.63■□□□□ 0.89
SLC6A7Q99884 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SLC6A7Q99884 MED17-227ENST00000640521 2047 ntTSL 5 BASIC20.63■□□□□ 0.89
SLC6A7Q99884 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC20.62■□□□□ 0.89
SLC6A7Q99884 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SLC6A7Q99884 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SLC6A7Q99884 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC20.62■□□□□ 0.89
SLC6A7Q99884 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SLC6A7Q99884 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SLC6A7Q99884 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SLC6A7Q99884 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC20.62■□□□□ 0.89
SLC6A7Q99884 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
SLC6A7Q99884 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SLC6A7Q99884 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC20.61■□□□□ 0.89
SLC6A7Q99884 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SLC6A7Q99884 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SLC6A7Q99884 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
SLC6A7Q99884 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SLC6A7Q99884 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SLC6A7Q99884 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
SLC6A7Q99884 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC20.61■□□□□ 0.89
SLC6A7Q99884 AC010501.1-201ENST00000606270 1962 ntBASIC20.61■□□□□ 0.89
SLC6A7Q99884 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SLC6A7Q99884 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
SLC6A7Q99884 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SLC6A7Q99884 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC20.6■□□□□ 0.89
SLC6A7Q99884 RPS2-210ENST00000530225 765 ntTSL 2 BASIC20.6■□□□□ 0.89
SLC6A7Q99884 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SLC6A7Q99884 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
SLC6A7Q99884 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
SLC6A7Q99884 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SLC6A7Q99884 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
SLC6A7Q99884 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SLC6A7Q99884 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC20.59■□□□□ 0.89
SLC6A7Q99884 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 11.5 ms