Protein–RNA interactions for Protein: Q96KN7

RPGRIP1, X-linked retinitis pigmentosa GTPase regulator-interacting protein 1, humanhuman

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1Q96KN7 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.81
RPGRIP1Q96KN7 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
RPGRIP1Q96KN7 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
RPGRIP1Q96KN7 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC26.33■■□□□ 1.81
RPGRIP1Q96KN7 MEST-211ENST00000437945 1455 ntTSL 5 BASIC26.33■■□□□ 1.81
RPGRIP1Q96KN7 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
RPGRIP1Q96KN7 AC092803.2-201ENST00000564287 1899 ntBASIC26.33■■□□□ 1.81
RPGRIP1Q96KN7 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
RPGRIP1Q96KN7 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
RPGRIP1Q96KN7 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.81
RPGRIP1Q96KN7 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
RPGRIP1Q96KN7 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC26.33■■□□□ 1.8
RPGRIP1Q96KN7 SNAI3-AS1-204ENST00000567997 2048 ntBASIC26.32■■□□□ 1.8
RPGRIP1Q96KN7 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC26.32■■□□□ 1.8
RPGRIP1Q96KN7 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
RPGRIP1Q96KN7 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
RPGRIP1Q96KN7 AC026202.3-201ENST00000600805 1127 ntBASIC26.32■■□□□ 1.8
RPGRIP1Q96KN7 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC26.32■■□□□ 1.8
RPGRIP1Q96KN7 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC26.32■■□□□ 1.8
RPGRIP1Q96KN7 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC26.31■■□□□ 1.8
RPGRIP1Q96KN7 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC26.31■■□□□ 1.8
RPGRIP1Q96KN7 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
RPGRIP1Q96KN7 DUX4L9-201ENST00000449051 1259 ntBASIC26.31■■□□□ 1.8
RPGRIP1Q96KN7 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
RPGRIP1Q96KN7 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC26.31■■□□□ 1.8
RPGRIP1Q96KN7 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC26.31■■□□□ 1.8
RPGRIP1Q96KN7 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
RPGRIP1Q96KN7 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC26.3■■□□□ 1.8
RPGRIP1Q96KN7 AC009299.2-201ENST00000482477 511 ntBASIC26.3■■□□□ 1.8
RPGRIP1Q96KN7 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
RPGRIP1Q96KN7 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC26.3■■□□□ 1.8
RPGRIP1Q96KN7 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC26.3■■□□□ 1.8
RPGRIP1Q96KN7 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
RPGRIP1Q96KN7 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
RPGRIP1Q96KN7 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC26.29■■□□□ 1.8
RPGRIP1Q96KN7 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC26.29■■□□□ 1.8
RPGRIP1Q96KN7 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC26.29■■□□□ 1.8
RPGRIP1Q96KN7 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
RPGRIP1Q96KN7 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
RPGRIP1Q96KN7 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
RPGRIP1Q96KN7 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
RPGRIP1Q96KN7 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
RPGRIP1Q96KN7 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
RPGRIP1Q96KN7 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC26.27■■□□□ 1.8
RPGRIP1Q96KN7 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
RPGRIP1Q96KN7 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC26.27■■□□□ 1.8
RPGRIP1Q96KN7 RP9P-202ENST00000450133 1212 ntBASIC26.27■■□□□ 1.8
RPGRIP1Q96KN7 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC26.27■■□□□ 1.8
RPGRIP1Q96KN7 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
RPGRIP1Q96KN7 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
RPGRIP1Q96KN7 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
RPGRIP1Q96KN7 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
RPGRIP1Q96KN7 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
RPGRIP1Q96KN7 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
RPGRIP1Q96KN7 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC26.26■■□□□ 1.79
RPGRIP1Q96KN7 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
RPGRIP1Q96KN7 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC26.25■■□□□ 1.79
RPGRIP1Q96KN7 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
RPGRIP1Q96KN7 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC26.25■■□□□ 1.79
RPGRIP1Q96KN7 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC26.25■■□□□ 1.79
RPGRIP1Q96KN7 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC26.25■■□□□ 1.79
RPGRIP1Q96KN7 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC26.25■■□□□ 1.79
RPGRIP1Q96KN7 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC26.25■■□□□ 1.79
RPGRIP1Q96KN7 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC26.25■■□□□ 1.79
RPGRIP1Q96KN7 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC26.25■■□□□ 1.79
RPGRIP1Q96KN7 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC26.24■■□□□ 1.79
RPGRIP1Q96KN7 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
RPGRIP1Q96KN7 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC26.24■■□□□ 1.79
RPGRIP1Q96KN7 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
RPGRIP1Q96KN7 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
RPGRIP1Q96KN7 THA1P-201ENST00000590384 1145 ntBASIC26.24■■□□□ 1.79
RPGRIP1Q96KN7 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
RPGRIP1Q96KN7 YBX1P4-201ENST00000392794 808 ntBASIC26.23■■□□□ 1.79
RPGRIP1Q96KN7 AC074183.2-201ENST00000623112 922 ntBASIC26.23■■□□□ 1.79
RPGRIP1Q96KN7 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC26.23■■□□□ 1.79
RPGRIP1Q96KN7 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC26.23■■□□□ 1.79
RPGRIP1Q96KN7 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
RPGRIP1Q96KN7 AL359258.2-201ENST00000564063 1566 ntBASIC26.22■■□□□ 1.79
RPGRIP1Q96KN7 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC26.22■■□□□ 1.79
RPGRIP1Q96KN7 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC26.22■■□□□ 1.79
RPGRIP1Q96KN7 AC139795.1-202ENST00000500444 432 ntBASIC26.22■■□□□ 1.79
RPGRIP1Q96KN7 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
RPGRIP1Q96KN7 HES6-204ENST00000409182 863 ntTSL 2 BASIC26.21■■□□□ 1.79
RPGRIP1Q96KN7 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC26.21■■□□□ 1.79
RPGRIP1Q96KN7 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
RPGRIP1Q96KN7 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC26.21■■□□□ 1.79
RPGRIP1Q96KN7 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC26.2■■□□□ 1.79
RPGRIP1Q96KN7 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC26.2■■□□□ 1.78
RPGRIP1Q96KN7 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
RPGRIP1Q96KN7 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC26.2■■□□□ 1.78
RPGRIP1Q96KN7 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
RPGRIP1Q96KN7 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC26.2■■□□□ 1.78
RPGRIP1Q96KN7 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC26.2■■□□□ 1.78
RPGRIP1Q96KN7 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
RPGRIP1Q96KN7 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
RPGRIP1Q96KN7 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
RPGRIP1Q96KN7 BEX3-202ENST00000372634 753 ntTSL 2 BASIC26.19■■□□□ 1.78
RPGRIP1Q96KN7 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC26.19■■□□□ 1.78
RPGRIP1Q96KN7 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
RPGRIP1Q96KN7 SPCS2P3-201ENST00000500401 656 ntBASIC26.18■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms