Protein–RNA interactions for Protein: Q96FV3

TSPAN17, Tetraspanin-17, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN17Q96FV3 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
TSPAN17Q96FV3 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
TSPAN17Q96FV3 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
TSPAN17Q96FV3 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC23.83■■□□□ 1.4
TSPAN17Q96FV3 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
TSPAN17Q96FV3 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
TSPAN17Q96FV3 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
TSPAN17Q96FV3 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC23.82■■□□□ 1.4
TSPAN17Q96FV3 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
TSPAN17Q96FV3 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
TSPAN17Q96FV3 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
TSPAN17Q96FV3 PFN2-211ENST00000489155 636 ntTSL 4 BASIC23.81■■□□□ 1.4
TSPAN17Q96FV3 AL157400.5-201ENST00000507624 621 ntBASIC23.81■■□□□ 1.4
TSPAN17Q96FV3 AC060814.1-201ENST00000554326 538 ntBASIC23.81■■□□□ 1.4
TSPAN17Q96FV3 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
TSPAN17Q96FV3 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC23.8■■□□□ 1.4
TSPAN17Q96FV3 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC23.8■■□□□ 1.4
TSPAN17Q96FV3 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC23.8■■□□□ 1.4
TSPAN17Q96FV3 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
TSPAN17Q96FV3 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC23.79■■□□□ 1.4
TSPAN17Q96FV3 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
TSPAN17Q96FV3 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
TSPAN17Q96FV3 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC23.79■■□□□ 1.4
TSPAN17Q96FV3 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
TSPAN17Q96FV3 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC23.79■■□□□ 1.4
TSPAN17Q96FV3 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
TSPAN17Q96FV3 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
TSPAN17Q96FV3 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
TSPAN17Q96FV3 TPT1-202ENST00000379055 948 ntTSL 2 BASIC23.78■■□□□ 1.4
TSPAN17Q96FV3 MIR639-201ENST00000384974 98 ntBASIC23.78■■□□□ 1.4
TSPAN17Q96FV3 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
TSPAN17Q96FV3 AC025884.2-201ENST00000553429 711 ntBASIC23.78■■□□□ 1.4
TSPAN17Q96FV3 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC23.78■■□□□ 1.4
TSPAN17Q96FV3 MIR3960-201ENST00000583311 91 ntBASIC23.78■■□□□ 1.4
TSPAN17Q96FV3 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
TSPAN17Q96FV3 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
TSPAN17Q96FV3 AC022211.4-201ENST00000625094 2161 ntBASIC23.78■■□□□ 1.4
TSPAN17Q96FV3 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
TSPAN17Q96FV3 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
TSPAN17Q96FV3 MOB2-207ENST00000614710 705 ntTSL 5 BASIC23.77■■□□□ 1.4
TSPAN17Q96FV3 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
TSPAN17Q96FV3 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
TSPAN17Q96FV3 PVT1-219ENST00000523427 938 ntTSL 3 BASIC23.76■■□□□ 1.39
TSPAN17Q96FV3 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
TSPAN17Q96FV3 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
TSPAN17Q96FV3 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
TSPAN17Q96FV3 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
TSPAN17Q96FV3 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
TSPAN17Q96FV3 AC097639.1-201ENST00000565519 1891 ntBASIC23.75■■□□□ 1.39
TSPAN17Q96FV3 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
TSPAN17Q96FV3 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
TSPAN17Q96FV3 MED17-227ENST00000640521 2047 ntTSL 5 BASIC23.74■■□□□ 1.39
TSPAN17Q96FV3 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
TSPAN17Q96FV3 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
TSPAN17Q96FV3 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC23.74■■□□□ 1.39
TSPAN17Q96FV3 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC23.74■■□□□ 1.39
TSPAN17Q96FV3 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
TSPAN17Q96FV3 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
TSPAN17Q96FV3 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
TSPAN17Q96FV3 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
TSPAN17Q96FV3 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC23.73■■□□□ 1.39
TSPAN17Q96FV3 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
TSPAN17Q96FV3 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
TSPAN17Q96FV3 SMPD5-203ENST00000639008 1464 ntBASIC23.73■■□□□ 1.39
TSPAN17Q96FV3 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
TSPAN17Q96FV3 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC23.72■■□□□ 1.39
TSPAN17Q96FV3 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
TSPAN17Q96FV3 AC092296.2-201ENST00000589470 999 ntBASIC23.72■■□□□ 1.39
TSPAN17Q96FV3 REST-210ENST00000638187 1334 ntTSL 5 BASIC23.72■■□□□ 1.39
TSPAN17Q96FV3 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
TSPAN17Q96FV3 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC23.71■■□□□ 1.39
TSPAN17Q96FV3 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
TSPAN17Q96FV3 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC23.71■■□□□ 1.39
TSPAN17Q96FV3 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
TSPAN17Q96FV3 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
TSPAN17Q96FV3 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC23.7■■□□□ 1.38
TSPAN17Q96FV3 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
TSPAN17Q96FV3 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC23.7■■□□□ 1.38
TSPAN17Q96FV3 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
TSPAN17Q96FV3 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
TSPAN17Q96FV3 AC138932.3-201ENST00000567634 1902 ntBASIC23.69■■□□□ 1.38
TSPAN17Q96FV3 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
TSPAN17Q96FV3 RPS2-202ENST00000526522 924 ntTSL 2 BASIC23.69■■□□□ 1.38
TSPAN17Q96FV3 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC23.69■■□□□ 1.38
TSPAN17Q96FV3 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC23.69■■□□□ 1.38
TSPAN17Q96FV3 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC23.69■■□□□ 1.38
TSPAN17Q96FV3 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
TSPAN17Q96FV3 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
TSPAN17Q96FV3 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
TSPAN17Q96FV3 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
TSPAN17Q96FV3 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC23.68■■□□□ 1.38
TSPAN17Q96FV3 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC23.68■■□□□ 1.38
TSPAN17Q96FV3 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
TSPAN17Q96FV3 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
TSPAN17Q96FV3 ECEL1P2-201ENST00000461596 1295 ntBASIC23.68■■□□□ 1.38
TSPAN17Q96FV3 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC23.68■■□□□ 1.38
TSPAN17Q96FV3 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
TSPAN17Q96FV3 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
TSPAN17Q96FV3 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC23.68■■□□□ 1.38
TSPAN17Q96FV3 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms