Protein–RNA interactions for Protein: Q96BH1

RNF25, E3 ubiquitin-protein ligase RNF25, humanhuman

Predicted RBP Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF25Q96BH1 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
RNF25Q96BH1 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC25.16■■□□□ 1.62
RNF25Q96BH1 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC25.16■■□□□ 1.62
RNF25Q96BH1 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC25.16■■□□□ 1.62
RNF25Q96BH1 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
RNF25Q96BH1 MIR639-201ENST00000384974 98 ntBASIC25.15■■□□□ 1.62
RNF25Q96BH1 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC25.15■■□□□ 1.62
RNF25Q96BH1 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC25.15■■□□□ 1.62
RNF25Q96BH1 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
RNF25Q96BH1 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
RNF25Q96BH1 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
RNF25Q96BH1 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC25.14■■□□□ 1.61
RNF25Q96BH1 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
RNF25Q96BH1 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC25.13■■□□□ 1.61
RNF25Q96BH1 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC25.13■■□□□ 1.61
RNF25Q96BH1 AL157400.5-201ENST00000507624 621 ntBASIC25.12■■□□□ 1.61
RNF25Q96BH1 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
RNF25Q96BH1 AC060814.1-201ENST00000554326 538 ntBASIC25.12■■□□□ 1.61
RNF25Q96BH1 MOB2-207ENST00000614710 705 ntTSL 5 BASIC25.12■■□□□ 1.61
RNF25Q96BH1 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
RNF25Q96BH1 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
RNF25Q96BH1 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC25.12■■□□□ 1.61
RNF25Q96BH1 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
RNF25Q96BH1 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
RNF25Q96BH1 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
RNF25Q96BH1 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
RNF25Q96BH1 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC25.11■■□□□ 1.61
RNF25Q96BH1 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC25.11■■□□□ 1.61
RNF25Q96BH1 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
RNF25Q96BH1 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC25.1■■□□□ 1.61
RNF25Q96BH1 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
RNF25Q96BH1 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC25.1■■□□□ 1.61
RNF25Q96BH1 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
RNF25Q96BH1 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
RNF25Q96BH1 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC25.09■■□□□ 1.61
RNF25Q96BH1 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
RNF25Q96BH1 TPT1-202ENST00000379055 948 ntTSL 2 BASIC25.09■■□□□ 1.61
RNF25Q96BH1 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC25.08■■□□□ 1.61
RNF25Q96BH1 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
RNF25Q96BH1 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC25.08■■□□□ 1.61
RNF25Q96BH1 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
RNF25Q96BH1 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC25.08■■□□□ 1.6
RNF25Q96BH1 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC25.08■■□□□ 1.6
RNF25Q96BH1 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC25.07■■□□□ 1.6
RNF25Q96BH1 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
RNF25Q96BH1 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC25.07■■□□□ 1.6
RNF25Q96BH1 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC25.07■■□□□ 1.6
RNF25Q96BH1 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
RNF25Q96BH1 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC25.06■■□□□ 1.6
RNF25Q96BH1 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
RNF25Q96BH1 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
RNF25Q96BH1 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
RNF25Q96BH1 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC25.05■■□□□ 1.6
RNF25Q96BH1 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
RNF25Q96BH1 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
RNF25Q96BH1 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC25.05■■□□□ 1.6
RNF25Q96BH1 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC25.05■■□□□ 1.6
RNF25Q96BH1 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC25.04■■□□□ 1.6
RNF25Q96BH1 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC25.04■■□□□ 1.6
RNF25Q96BH1 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
RNF25Q96BH1 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
RNF25Q96BH1 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
RNF25Q96BH1 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
RNF25Q96BH1 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC25.04■■□□□ 1.6
RNF25Q96BH1 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC25.03■■□□□ 1.6
RNF25Q96BH1 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC25.03■■□□□ 1.6
RNF25Q96BH1 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC25.03■■□□□ 1.6
RNF25Q96BH1 AC025884.2-201ENST00000553429 711 ntBASIC25.03■■□□□ 1.6
RNF25Q96BH1 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC25.03■■□□□ 1.6
RNF25Q96BH1 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC25.03■■□□□ 1.6
RNF25Q96BH1 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
RNF25Q96BH1 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
RNF25Q96BH1 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
RNF25Q96BH1 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC25.02■■□□□ 1.6
RNF25Q96BH1 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC25.02■■□□□ 1.6
RNF25Q96BH1 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC25.02■■□□□ 1.6
RNF25Q96BH1 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC25.02■■□□□ 1.6
RNF25Q96BH1 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
RNF25Q96BH1 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC25.02■■□□□ 1.6
RNF25Q96BH1 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
RNF25Q96BH1 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC25.02■■□□□ 1.6
RNF25Q96BH1 PFN2-211ENST00000489155 636 ntTSL 4 BASIC25.01■■□□□ 1.59
RNF25Q96BH1 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC25.01■■□□□ 1.59
RNF25Q96BH1 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC25.01■■□□□ 1.59
RNF25Q96BH1 SRP68-213ENST00000629930 165 ntTSL 5 BASIC25.01■■□□□ 1.59
RNF25Q96BH1 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
RNF25Q96BH1 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
RNF25Q96BH1 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC25■■□□□ 1.59
RNF25Q96BH1 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC25■■□□□ 1.59
RNF25Q96BH1 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC25■■□□□ 1.59
RNF25Q96BH1 AC092296.2-201ENST00000589470 999 ntBASIC25■■□□□ 1.59
RNF25Q96BH1 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC25■■□□□ 1.59
RNF25Q96BH1 AC022413.1-201ENST00000624602 984 ntBASIC25■■□□□ 1.59
RNF25Q96BH1 SMPD5-203ENST00000639008 1464 ntBASIC25■■□□□ 1.59
RNF25Q96BH1 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC25■■□□□ 1.59
RNF25Q96BH1 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC25■■□□□ 1.59
RNF25Q96BH1 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC25■■□□□ 1.59
RNF25Q96BH1 AC022211.4-201ENST00000625094 2161 ntBASIC25■■□□□ 1.59
RNF25Q96BH1 THRA-202ENST00000394121 2260 ntTSL 2 BASIC25■■□□□ 1.59
RNF25Q96BH1 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms