Protein–RNA interactions for Protein: Q92922

SMARCC1, SWI/SNF complex subunit SMARCC1, humanhuman

Predicted RBP Predictions only

Length 1,105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1Q92922 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
SMARCC1Q92922 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC31.24■■■□□ 2.59
SMARCC1Q92922 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC31.24■■■□□ 2.59
SMARCC1Q92922 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
SMARCC1Q92922 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC31.24■■■□□ 2.59
SMARCC1Q92922 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
SMARCC1Q92922 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC31.24■■■□□ 2.59
SMARCC1Q92922 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC31.24■■■□□ 2.59
SMARCC1Q92922 AL449106.1-201ENST00000608517 1980 ntBASIC31.23■■■□□ 2.59
SMARCC1Q92922 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
SMARCC1Q92922 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
SMARCC1Q92922 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
SMARCC1Q92922 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
SMARCC1Q92922 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC31.22■■■□□ 2.59
SMARCC1Q92922 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC31.22■■■□□ 2.59
SMARCC1Q92922 AL139246.5-201ENST00000606645 996 ntBASIC31.22■■■□□ 2.59
SMARCC1Q92922 AC092028.1-203ENST00000608262 953 ntBASIC31.22■■■□□ 2.59
SMARCC1Q92922 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
SMARCC1Q92922 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC31.21■■■□□ 2.59
SMARCC1Q92922 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC31.21■■■□□ 2.59
SMARCC1Q92922 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
SMARCC1Q92922 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC31.21■■■□□ 2.59
SMARCC1Q92922 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
SMARCC1Q92922 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
SMARCC1Q92922 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC31.2■■■□□ 2.59
SMARCC1Q92922 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC31.2■■■□□ 2.58
SMARCC1Q92922 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
SMARCC1Q92922 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC31.19■■■□□ 2.58
SMARCC1Q92922 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC31.19■■■□□ 2.58
SMARCC1Q92922 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC31.19■■■□□ 2.58
SMARCC1Q92922 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC31.19■■■□□ 2.58
SMARCC1Q92922 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC31.19■■■□□ 2.58
SMARCC1Q92922 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
SMARCC1Q92922 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC31.19■■■□□ 2.58
SMARCC1Q92922 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
SMARCC1Q92922 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC31.18■■■□□ 2.58
SMARCC1Q92922 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC31.18■■■□□ 2.58
SMARCC1Q92922 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
SMARCC1Q92922 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
SMARCC1Q92922 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC31.17■■■□□ 2.58
SMARCC1Q92922 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC31.17■■■□□ 2.58
SMARCC1Q92922 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
SMARCC1Q92922 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC31.16■■■□□ 2.58
SMARCC1Q92922 NALT1-201ENST00000429224 738 ntTSL 5 BASIC31.16■■■□□ 2.58
SMARCC1Q92922 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC31.16■■■□□ 2.58
SMARCC1Q92922 AC131281.2-201ENST00000520478 145 ntBASIC31.16■■■□□ 2.58
SMARCC1Q92922 TRIR-202ENST00000588213 841 ntTSL 3 BASIC31.16■■■□□ 2.58
SMARCC1Q92922 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
SMARCC1Q92922 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC31.16■■■□□ 2.58
SMARCC1Q92922 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC31.15■■■□□ 2.58
SMARCC1Q92922 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC31.15■■■□□ 2.58
SMARCC1Q92922 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
SMARCC1Q92922 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC31.15■■■□□ 2.58
SMARCC1Q92922 RPP21-222ENST00000433076 577 ntTSL 2 BASIC31.15■■■□□ 2.58
SMARCC1Q92922 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC31.15■■■□□ 2.58
SMARCC1Q92922 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
SMARCC1Q92922 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC31.14■■■□□ 2.58
SMARCC1Q92922 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
SMARCC1Q92922 SRR-208ENST00000576848 588 ntTSL 4 BASIC31.14■■■□□ 2.58
SMARCC1Q92922 RALB-208ENST00000631312 311 ntTSL 5 BASIC31.14■■■□□ 2.58
SMARCC1Q92922 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC31.14■■■□□ 2.58
SMARCC1Q92922 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
SMARCC1Q92922 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC31.13■■■□□ 2.57
SMARCC1Q92922 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC31.13■■■□□ 2.57
SMARCC1Q92922 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC31.13■■■□□ 2.57
SMARCC1Q92922 ABCB10P1-201ENST00000614297 2181 ntBASIC31.13■■■□□ 2.57
SMARCC1Q92922 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
SMARCC1Q92922 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC31.12■■■□□ 2.57
SMARCC1Q92922 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC31.12■■■□□ 2.57
SMARCC1Q92922 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC31.12■■■□□ 2.57
SMARCC1Q92922 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC31.12■■■□□ 2.57
SMARCC1Q92922 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC31.12■■■□□ 2.57
SMARCC1Q92922 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
SMARCC1Q92922 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC31.11■■■□□ 2.57
SMARCC1Q92922 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC31.1■■■□□ 2.57
SMARCC1Q92922 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC31.1■■■□□ 2.57
SMARCC1Q92922 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
SMARCC1Q92922 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
SMARCC1Q92922 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
SMARCC1Q92922 MIR4281-201ENST00000580852 62 ntBASIC31.1■■■□□ 2.57
SMARCC1Q92922 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
SMARCC1Q92922 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC31.09■■■□□ 2.57
SMARCC1Q92922 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC31.09■■■□□ 2.57
SMARCC1Q92922 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC31.09■■■□□ 2.57
SMARCC1Q92922 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
SMARCC1Q92922 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC31.08■■■□□ 2.57
SMARCC1Q92922 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC31.08■■■□□ 2.57
SMARCC1Q92922 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
SMARCC1Q92922 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC31.08■■■□□ 2.57
SMARCC1Q92922 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC31.08■■■□□ 2.57
SMARCC1Q92922 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC31.07■■■□□ 2.56
SMARCC1Q92922 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC31.07■■■□□ 2.56
SMARCC1Q92922 AL136116.3-201ENST00000402907 1138 ntBASIC31.07■■■□□ 2.56
SMARCC1Q92922 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
SMARCC1Q92922 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC31.07■■■□□ 2.56
SMARCC1Q92922 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC31.06■■■□□ 2.56
SMARCC1Q92922 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
SMARCC1Q92922 BX255925.1-201ENST00000566954 1854 ntBASIC31.06■■■□□ 2.56
SMARCC1Q92922 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC31.06■■■□□ 2.56
SMARCC1Q92922 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC31.06■■■□□ 2.56
Retrieved 100 of 98,524 protein–RNA pairs in 14.3 ms