Protein–RNA interactions for Protein: Q8TF05

PPP4R1, Serine/threonine-protein phosphatase 4 regulatory subunit 1, humanhuman

Predictions only

Length 950 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1Q8TF05 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC23.9■■□□□ 1.42
PPP4R1Q8TF05 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
PPP4R1Q8TF05 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
PPP4R1Q8TF05 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC23.9■■□□□ 1.42
PPP4R1Q8TF05 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
PPP4R1Q8TF05 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
PPP4R1Q8TF05 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC23.89■■□□□ 1.41
PPP4R1Q8TF05 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
PPP4R1Q8TF05 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
PPP4R1Q8TF05 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC23.89■■□□□ 1.41
PPP4R1Q8TF05 MIR219A2-201ENST00000608502 1504 ntBASIC23.89■■□□□ 1.41
PPP4R1Q8TF05 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
PPP4R1Q8TF05 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
PPP4R1Q8TF05 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
PPP4R1Q8TF05 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
PPP4R1Q8TF05 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC23.88■■□□□ 1.41
PPP4R1Q8TF05 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
PPP4R1Q8TF05 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
PPP4R1Q8TF05 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
PPP4R1Q8TF05 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
PPP4R1Q8TF05 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
PPP4R1Q8TF05 SRP68-213ENST00000629930 165 ntTSL 5 BASIC23.87■■□□□ 1.41
PPP4R1Q8TF05 MED17-227ENST00000640521 2047 ntTSL 5 BASIC23.87■■□□□ 1.41
PPP4R1Q8TF05 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
PPP4R1Q8TF05 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
PPP4R1Q8TF05 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
PPP4R1Q8TF05 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
PPP4R1Q8TF05 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC23.86■■□□□ 1.41
PPP4R1Q8TF05 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
PPP4R1Q8TF05 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
PPP4R1Q8TF05 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
PPP4R1Q8TF05 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC23.86■■□□□ 1.41
PPP4R1Q8TF05 THRA-202ENST00000394121 2260 ntTSL 2 BASIC23.85■■□□□ 1.41
PPP4R1Q8TF05 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
PPP4R1Q8TF05 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC23.85■■□□□ 1.41
PPP4R1Q8TF05 AC148477.6-201ENST00000623746 465 ntBASIC23.85■■□□□ 1.41
PPP4R1Q8TF05 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
PPP4R1Q8TF05 AC022211.4-201ENST00000625094 2161 ntBASIC23.84■■□□□ 1.41
PPP4R1Q8TF05 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC23.84■■□□□ 1.41
PPP4R1Q8TF05 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
PPP4R1Q8TF05 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC23.83■■□□□ 1.41
PPP4R1Q8TF05 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
PPP4R1Q8TF05 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
PPP4R1Q8TF05 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
PPP4R1Q8TF05 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PPP4R1Q8TF05 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
PPP4R1Q8TF05 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC23.82■■□□□ 1.4
PPP4R1Q8TF05 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC23.82■■□□□ 1.4
PPP4R1Q8TF05 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
PPP4R1Q8TF05 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC23.81■■□□□ 1.4
PPP4R1Q8TF05 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC23.81■■□□□ 1.4
PPP4R1Q8TF05 CHST11-203ENST00000547956 936 ntTSL 2 BASIC23.81■■□□□ 1.4
PPP4R1Q8TF05 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC23.81■■□□□ 1.4
PPP4R1Q8TF05 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC23.81■■□□□ 1.4
PPP4R1Q8TF05 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
PPP4R1Q8TF05 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PPP4R1Q8TF05 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PPP4R1Q8TF05 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
PPP4R1Q8TF05 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC23.8■■□□□ 1.4
PPP4R1Q8TF05 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PPP4R1Q8TF05 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PPP4R1Q8TF05 AC138932.3-201ENST00000567634 1902 ntBASIC23.8■■□□□ 1.4
PPP4R1Q8TF05 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
PPP4R1Q8TF05 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
PPP4R1Q8TF05 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC23.79■■□□□ 1.4
PPP4R1Q8TF05 AL359258.2-201ENST00000564063 1566 ntBASIC23.78■■□□□ 1.4
PPP4R1Q8TF05 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
PPP4R1Q8TF05 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
PPP4R1Q8TF05 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PPP4R1Q8TF05 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
PPP4R1Q8TF05 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PPP4R1Q8TF05 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PPP4R1Q8TF05 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
PPP4R1Q8TF05 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC23.77■■□□□ 1.4
PPP4R1Q8TF05 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
PPP4R1Q8TF05 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC23.77■■□□□ 1.4
PPP4R1Q8TF05 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC23.77■■□□□ 1.4
PPP4R1Q8TF05 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PPP4R1Q8TF05 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PPP4R1Q8TF05 AL139125.2-201ENST00000623134 1869 ntBASIC23.77■■□□□ 1.4
PPP4R1Q8TF05 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC23.77■■□□□ 1.39
PPP4R1Q8TF05 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC23.76■■□□□ 1.39
PPP4R1Q8TF05 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC23.76■■□□□ 1.39
PPP4R1Q8TF05 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC23.76■■□□□ 1.39
PPP4R1Q8TF05 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
PPP4R1Q8TF05 TPT1-202ENST00000379055 948 ntTSL 2 BASIC23.76■■□□□ 1.39
PPP4R1Q8TF05 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PPP4R1Q8TF05 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC23.76■■□□□ 1.39
PPP4R1Q8TF05 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC23.76■■□□□ 1.39
PPP4R1Q8TF05 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC23.75■■□□□ 1.39
PPP4R1Q8TF05 RARRES2P2-201ENST00000394842 485 ntBASIC23.75■■□□□ 1.39
PPP4R1Q8TF05 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
PPP4R1Q8TF05 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
PPP4R1Q8TF05 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
PPP4R1Q8TF05 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
PPP4R1Q8TF05 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
PPP4R1Q8TF05 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
PPP4R1Q8TF05 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
PPP4R1Q8TF05 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
PPP4R1Q8TF05 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC23.74■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms