Protein–RNA interactions for Protein: Q8TB92

HMGCLL1, 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1Q8TB92 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC23.65■■□□□ 1.38
HMGCLL1Q8TB92 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC23.65■■□□□ 1.38
HMGCLL1Q8TB92 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
HMGCLL1Q8TB92 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.38
HMGCLL1Q8TB92 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
HMGCLL1Q8TB92 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
HMGCLL1Q8TB92 RP9P-202ENST00000450133 1212 ntBASIC23.64■■□□□ 1.37
HMGCLL1Q8TB92 GFER-205ENST00000569451 517 ntTSL 5 BASIC23.64■■□□□ 1.37
HMGCLL1Q8TB92 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC23.64■■□□□ 1.37
HMGCLL1Q8TB92 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC23.64■■□□□ 1.37
HMGCLL1Q8TB92 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
HMGCLL1Q8TB92 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
HMGCLL1Q8TB92 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC23.63■■□□□ 1.37
HMGCLL1Q8TB92 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
HMGCLL1Q8TB92 SNAI3-AS1-204ENST00000567997 2048 ntBASIC23.63■■□□□ 1.37
HMGCLL1Q8TB92 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
HMGCLL1Q8TB92 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC23.63■■□□□ 1.37
HMGCLL1Q8TB92 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC23.63■■□□□ 1.37
HMGCLL1Q8TB92 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC23.62■■□□□ 1.37
HMGCLL1Q8TB92 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC23.62■■□□□ 1.37
HMGCLL1Q8TB92 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
HMGCLL1Q8TB92 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC23.62■■□□□ 1.37
HMGCLL1Q8TB92 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
HMGCLL1Q8TB92 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
HMGCLL1Q8TB92 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
HMGCLL1Q8TB92 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
HMGCLL1Q8TB92 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC23.62■■□□□ 1.37
HMGCLL1Q8TB92 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC23.62■■□□□ 1.37
HMGCLL1Q8TB92 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC23.61■■□□□ 1.37
HMGCLL1Q8TB92 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
HMGCLL1Q8TB92 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
HMGCLL1Q8TB92 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
HMGCLL1Q8TB92 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
HMGCLL1Q8TB92 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
HMGCLL1Q8TB92 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
HMGCLL1Q8TB92 ERN1-208ENST00000606895 2068 ntBASIC23.6■■□□□ 1.37
HMGCLL1Q8TB92 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC23.59■■□□□ 1.37
HMGCLL1Q8TB92 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC23.59■■□□□ 1.37
HMGCLL1Q8TB92 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
HMGCLL1Q8TB92 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC23.59■■□□□ 1.37
HMGCLL1Q8TB92 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
HMGCLL1Q8TB92 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC23.59■■□□□ 1.37
HMGCLL1Q8TB92 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC23.59■■□□□ 1.37
HMGCLL1Q8TB92 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
HMGCLL1Q8TB92 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC23.58■■□□□ 1.37
HMGCLL1Q8TB92 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC23.58■■□□□ 1.37
HMGCLL1Q8TB92 ABHD17AP5-201ENST00000580133 923 ntBASIC23.58■■□□□ 1.37
HMGCLL1Q8TB92 AC093536.1-201ENST00000569153 554 ntBASIC23.57■■□□□ 1.36
HMGCLL1Q8TB92 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
HMGCLL1Q8TB92 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC23.56■■□□□ 1.36
HMGCLL1Q8TB92 AC026202.3-201ENST00000600805 1127 ntBASIC23.56■■□□□ 1.36
HMGCLL1Q8TB92 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC23.56■■□□□ 1.36
HMGCLL1Q8TB92 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
HMGCLL1Q8TB92 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
HMGCLL1Q8TB92 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC23.55■■□□□ 1.36
HMGCLL1Q8TB92 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC23.55■■□□□ 1.36
HMGCLL1Q8TB92 RAP2CP1-202ENST00000605179 643 ntBASIC23.55■■□□□ 1.36
HMGCLL1Q8TB92 HYI-213ENST00000583037 1322 ntTSL 5 BASIC23.55■■□□□ 1.36
HMGCLL1Q8TB92 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
HMGCLL1Q8TB92 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC23.54■■□□□ 1.36
HMGCLL1Q8TB92 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC23.54■■□□□ 1.36
HMGCLL1Q8TB92 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC23.54■■□□□ 1.36
HMGCLL1Q8TB92 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC23.54■■□□□ 1.36
HMGCLL1Q8TB92 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
HMGCLL1Q8TB92 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
HMGCLL1Q8TB92 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC23.53■■□□□ 1.36
HMGCLL1Q8TB92 AC010501.1-201ENST00000606270 1962 ntBASIC23.53■■□□□ 1.36
HMGCLL1Q8TB92 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
HMGCLL1Q8TB92 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
HMGCLL1Q8TB92 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC23.53■■□□□ 1.36
HMGCLL1Q8TB92 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC23.53■■□□□ 1.36
HMGCLL1Q8TB92 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC23.53■■□□□ 1.36
HMGCLL1Q8TB92 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
HMGCLL1Q8TB92 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
HMGCLL1Q8TB92 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC23.52■■□□□ 1.36
HMGCLL1Q8TB92 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC23.51■■□□□ 1.35
HMGCLL1Q8TB92 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC23.51■■□□□ 1.35
HMGCLL1Q8TB92 AC009831.1-201ENST00000580420 1582 ntBASIC23.51■■□□□ 1.35
HMGCLL1Q8TB92 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC23.51■■□□□ 1.35
HMGCLL1Q8TB92 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
HMGCLL1Q8TB92 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
HMGCLL1Q8TB92 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
HMGCLL1Q8TB92 HES4-204ENST00000484667 667 ntTSL 3 BASIC23.5■■□□□ 1.35
HMGCLL1Q8TB92 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC23.5■■□□□ 1.35
HMGCLL1Q8TB92 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
HMGCLL1Q8TB92 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC23.5■■□□□ 1.35
HMGCLL1Q8TB92 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
HMGCLL1Q8TB92 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
HMGCLL1Q8TB92 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
HMGCLL1Q8TB92 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC23.49■■□□□ 1.35
HMGCLL1Q8TB92 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC23.49■■□□□ 1.35
HMGCLL1Q8TB92 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
HMGCLL1Q8TB92 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
HMGCLL1Q8TB92 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC23.49■■□□□ 1.35
HMGCLL1Q8TB92 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC23.48■■□□□ 1.35
HMGCLL1Q8TB92 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
HMGCLL1Q8TB92 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC23.48■■□□□ 1.35
HMGCLL1Q8TB92 AC133552.2-201ENST00000619106 1032 ntBASIC23.48■■□□□ 1.35
HMGCLL1Q8TB92 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC23.48■■□□□ 1.35
HMGCLL1Q8TB92 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms