Protein–RNA interactions for Protein: Q8TB33

LINC01560, Putative uncharacterized protein encoded by LINC01560, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01560Q8TB33 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC21.01■□□□□ 0.95
LINC01560Q8TB33 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC21■□□□□ 0.95
LINC01560Q8TB33 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LINC01560Q8TB33 KRT18P10-201ENST00000388836 1287 ntBASIC21■□□□□ 0.95
LINC01560Q8TB33 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC21■□□□□ 0.95
LINC01560Q8TB33 Z92544.1-202ENST00000571933 1220 ntBASIC21■□□□□ 0.95
LINC01560Q8TB33 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC21■□□□□ 0.95
LINC01560Q8TB33 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC21■□□□□ 0.95
LINC01560Q8TB33 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LINC01560Q8TB33 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC21■□□□□ 0.95
LINC01560Q8TB33 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LINC01560Q8TB33 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
LINC01560Q8TB33 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC20.99■□□□□ 0.95
LINC01560Q8TB33 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LINC01560Q8TB33 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
LINC01560Q8TB33 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LINC01560Q8TB33 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LINC01560Q8TB33 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC20.98■□□□□ 0.95
LINC01560Q8TB33 CREM-229ENST00000474362 1030 ntTSL 2 BASIC20.98■□□□□ 0.95
LINC01560Q8TB33 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
LINC01560Q8TB33 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC20.97■□□□□ 0.95
LINC01560Q8TB33 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC20.97■□□□□ 0.95
LINC01560Q8TB33 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
LINC01560Q8TB33 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LINC01560Q8TB33 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
LINC01560Q8TB33 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
LINC01560Q8TB33 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
LINC01560Q8TB33 AC022616.5-201ENST00000518796 181 ntBASIC20.96■□□□□ 0.95
LINC01560Q8TB33 KRT125P-201ENST00000546827 989 ntBASIC20.96■□□□□ 0.95
LINC01560Q8TB33 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC20.96■□□□□ 0.95
LINC01560Q8TB33 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
LINC01560Q8TB33 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LINC01560Q8TB33 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LINC01560Q8TB33 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LINC01560Q8TB33 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
LINC01560Q8TB33 AC142472.1-201ENST00000612013 1741 ntBASIC20.95■□□□□ 0.94
LINC01560Q8TB33 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC20.95■□□□□ 0.94
LINC01560Q8TB33 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
LINC01560Q8TB33 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
LINC01560Q8TB33 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
LINC01560Q8TB33 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC20.95■□□□□ 0.94
LINC01560Q8TB33 GRAMD4P7-201ENST00000578182 1232 ntBASIC20.95■□□□□ 0.94
LINC01560Q8TB33 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC20.95■□□□□ 0.94
LINC01560Q8TB33 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LINC01560Q8TB33 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC20.94■□□□□ 0.94
LINC01560Q8TB33 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
LINC01560Q8TB33 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC20.94■□□□□ 0.94
LINC01560Q8TB33 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
LINC01560Q8TB33 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
LINC01560Q8TB33 BX664725.1-201ENST00000438252 379 ntBASIC20.94■□□□□ 0.94
LINC01560Q8TB33 MIR4787-201ENST00000607364 84 ntBASIC20.94■□□□□ 0.94
LINC01560Q8TB33 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LINC01560Q8TB33 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
LINC01560Q8TB33 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LINC01560Q8TB33 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
LINC01560Q8TB33 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
LINC01560Q8TB33 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
LINC01560Q8TB33 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LINC01560Q8TB33 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
LINC01560Q8TB33 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
LINC01560Q8TB33 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
LINC01560Q8TB33 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC20.93■□□□□ 0.94
LINC01560Q8TB33 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
LINC01560Q8TB33 AP004609.3-201ENST00000610705 1884 ntBASIC20.92■□□□□ 0.94
LINC01560Q8TB33 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
LINC01560Q8TB33 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
LINC01560Q8TB33 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
LINC01560Q8TB33 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LINC01560Q8TB33 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LINC01560Q8TB33 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
LINC01560Q8TB33 KRT18P24-201ENST00000344739 1156 ntBASIC20.91■□□□□ 0.94
LINC01560Q8TB33 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
LINC01560Q8TB33 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC20.91■□□□□ 0.94
LINC01560Q8TB33 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC20.91■□□□□ 0.94
LINC01560Q8TB33 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC20.91■□□□□ 0.94
LINC01560Q8TB33 AC019069.1-201ENST00000610008 1333 ntBASIC20.91■□□□□ 0.94
LINC01560Q8TB33 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
LINC01560Q8TB33 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LINC01560Q8TB33 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC20.9■□□□□ 0.94
LINC01560Q8TB33 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC20.9■□□□□ 0.94
LINC01560Q8TB33 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
LINC01560Q8TB33 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC20.9■□□□□ 0.94
LINC01560Q8TB33 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
LINC01560Q8TB33 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
LINC01560Q8TB33 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
LINC01560Q8TB33 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
LINC01560Q8TB33 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
LINC01560Q8TB33 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC20.89■□□□□ 0.93
LINC01560Q8TB33 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
LINC01560Q8TB33 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC20.89■□□□□ 0.93
LINC01560Q8TB33 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
LINC01560Q8TB33 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
LINC01560Q8TB33 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LINC01560Q8TB33 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LINC01560Q8TB33 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
LINC01560Q8TB33 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LINC01560Q8TB33 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
LINC01560Q8TB33 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC20.88■□□□□ 0.93
LINC01560Q8TB33 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
LINC01560Q8TB33 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 15 ms