Protein–RNA interactions for Protein: Q8NDX5

PHC3, Polyhomeotic-like protein 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3Q8NDX5 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
PHC3Q8NDX5 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC23.86■■□□□ 1.41
PHC3Q8NDX5 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC23.86■■□□□ 1.41
PHC3Q8NDX5 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
PHC3Q8NDX5 ABHD17AP5-201ENST00000580133 923 ntBASIC23.86■■□□□ 1.41
PHC3Q8NDX5 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
PHC3Q8NDX5 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC23.86■■□□□ 1.41
PHC3Q8NDX5 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
PHC3Q8NDX5 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
PHC3Q8NDX5 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC23.86■■□□□ 1.41
PHC3Q8NDX5 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC23.86■■□□□ 1.41
PHC3Q8NDX5 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
PHC3Q8NDX5 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC23.85■■□□□ 1.41
PHC3Q8NDX5 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC23.85■■□□□ 1.41
PHC3Q8NDX5 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC23.85■■□□□ 1.41
PHC3Q8NDX5 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
PHC3Q8NDX5 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
PHC3Q8NDX5 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
PHC3Q8NDX5 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC23.84■■□□□ 1.41
PHC3Q8NDX5 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
PHC3Q8NDX5 RP9P-202ENST00000450133 1212 ntBASIC23.84■■□□□ 1.41
PHC3Q8NDX5 MIR3960-201ENST00000583311 91 ntBASIC23.84■■□□□ 1.41
PHC3Q8NDX5 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
PHC3Q8NDX5 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
PHC3Q8NDX5 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC23.83■■□□□ 1.41
PHC3Q8NDX5 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC23.83■■□□□ 1.41
PHC3Q8NDX5 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.41
PHC3Q8NDX5 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC23.83■■□□□ 1.41
PHC3Q8NDX5 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
PHC3Q8NDX5 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.41
PHC3Q8NDX5 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
PHC3Q8NDX5 AC093536.1-201ENST00000569153 554 ntBASIC23.83■■□□□ 1.41
PHC3Q8NDX5 U85056.1-201ENST00000616429 682 ntBASIC23.83■■□□□ 1.41
PHC3Q8NDX5 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
PHC3Q8NDX5 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.4
PHC3Q8NDX5 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
PHC3Q8NDX5 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
PHC3Q8NDX5 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
PHC3Q8NDX5 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC23.82■■□□□ 1.4
PHC3Q8NDX5 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PHC3Q8NDX5 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC23.82■■□□□ 1.4
PHC3Q8NDX5 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC23.82■■□□□ 1.4
PHC3Q8NDX5 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC23.82■■□□□ 1.4
PHC3Q8NDX5 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
PHC3Q8NDX5 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
PHC3Q8NDX5 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC23.82■■□□□ 1.4
PHC3Q8NDX5 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PHC3Q8NDX5 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
PHC3Q8NDX5 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC23.81■■□□□ 1.4
PHC3Q8NDX5 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
PHC3Q8NDX5 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
PHC3Q8NDX5 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC23.81■■□□□ 1.4
PHC3Q8NDX5 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC23.81■■□□□ 1.4
PHC3Q8NDX5 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC23.81■■□□□ 1.4
PHC3Q8NDX5 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PHC3Q8NDX5 THRA-202ENST00000394121 2260 ntTSL 2 BASIC23.81■■□□□ 1.4
PHC3Q8NDX5 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PHC3Q8NDX5 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
PHC3Q8NDX5 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
PHC3Q8NDX5 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PHC3Q8NDX5 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
PHC3Q8NDX5 AC026202.3-201ENST00000600805 1127 ntBASIC23.79■■□□□ 1.4
PHC3Q8NDX5 AC133552.2-201ENST00000619106 1032 ntBASIC23.79■■□□□ 1.4
PHC3Q8NDX5 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
PHC3Q8NDX5 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PHC3Q8NDX5 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PHC3Q8NDX5 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC23.79■■□□□ 1.4
PHC3Q8NDX5 AC009831.1-201ENST00000580420 1582 ntBASIC23.78■■□□□ 1.4
PHC3Q8NDX5 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
PHC3Q8NDX5 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC23.78■■□□□ 1.4
PHC3Q8NDX5 RARA-203ENST00000394086 2008 ntTSL 2 BASIC23.78■■□□□ 1.4
PHC3Q8NDX5 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
PHC3Q8NDX5 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
PHC3Q8NDX5 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
PHC3Q8NDX5 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC23.78■■□□□ 1.4
PHC3Q8NDX5 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
PHC3Q8NDX5 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC23.78■■□□□ 1.4
PHC3Q8NDX5 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC23.77■■□□□ 1.4
PHC3Q8NDX5 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
PHC3Q8NDX5 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
PHC3Q8NDX5 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC23.77■■□□□ 1.4
PHC3Q8NDX5 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC23.77■■□□□ 1.4
PHC3Q8NDX5 AC133561.1-201ENST00000568600 2415 ntBASIC23.76■■□□□ 1.39
PHC3Q8NDX5 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
PHC3Q8NDX5 GFER-205ENST00000569451 517 ntTSL 5 BASIC23.76■■□□□ 1.39
PHC3Q8NDX5 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC23.76■■□□□ 1.39
PHC3Q8NDX5 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
PHC3Q8NDX5 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
PHC3Q8NDX5 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
PHC3Q8NDX5 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
PHC3Q8NDX5 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
PHC3Q8NDX5 NTF6A-201ENST00000591175 560 ntBASIC23.75■■□□□ 1.39
PHC3Q8NDX5 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
PHC3Q8NDX5 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC23.75■■□□□ 1.39
PHC3Q8NDX5 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
PHC3Q8NDX5 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
PHC3Q8NDX5 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
PHC3Q8NDX5 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
PHC3Q8NDX5 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC23.74■■□□□ 1.39
PHC3Q8NDX5 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms