Protein–RNA interactions for Protein: Q8NBS3

SLC4A11, Sodium bicarbonate transporter-like protein 11, humanhuman

Predictions only

Length 891 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC4A11Q8NBS3 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
SLC4A11Q8NBS3 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC25.63■■□□□ 1.69
SLC4A11Q8NBS3 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC25.62■■□□□ 1.69
SLC4A11Q8NBS3 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
SLC4A11Q8NBS3 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC25.62■■□□□ 1.69
SLC4A11Q8NBS3 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC25.62■■□□□ 1.69
SLC4A11Q8NBS3 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC25.62■■□□□ 1.69
SLC4A11Q8NBS3 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
SLC4A11Q8NBS3 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC25.61■■□□□ 1.69
SLC4A11Q8NBS3 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
SLC4A11Q8NBS3 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC25.61■■□□□ 1.69
SLC4A11Q8NBS3 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC25.61■■□□□ 1.69
SLC4A11Q8NBS3 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC25.61■■□□□ 1.69
SLC4A11Q8NBS3 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC25.61■■□□□ 1.69
SLC4A11Q8NBS3 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC25.6■■□□□ 1.69
SLC4A11Q8NBS3 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC25.6■■□□□ 1.69
SLC4A11Q8NBS3 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
SLC4A11Q8NBS3 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC25.59■■□□□ 1.69
SLC4A11Q8NBS3 DUX4L9-201ENST00000449051 1259 ntBASIC25.59■■□□□ 1.69
SLC4A11Q8NBS3 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
SLC4A11Q8NBS3 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC25.58■■□□□ 1.69
SLC4A11Q8NBS3 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
SLC4A11Q8NBS3 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
SLC4A11Q8NBS3 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC25.58■■□□□ 1.69
SLC4A11Q8NBS3 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC25.58■■□□□ 1.68
SLC4A11Q8NBS3 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
SLC4A11Q8NBS3 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC25.57■■□□□ 1.68
SLC4A11Q8NBS3 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC25.57■■□□□ 1.68
SLC4A11Q8NBS3 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC25.57■■□□□ 1.68
SLC4A11Q8NBS3 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
SLC4A11Q8NBS3 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC25.57■■□□□ 1.68
SLC4A11Q8NBS3 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC25.57■■□□□ 1.68
SLC4A11Q8NBS3 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
SLC4A11Q8NBS3 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC25.56■■□□□ 1.68
SLC4A11Q8NBS3 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC25.56■■□□□ 1.68
SLC4A11Q8NBS3 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC25.56■■□□□ 1.68
SLC4A11Q8NBS3 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC25.56■■□□□ 1.68
SLC4A11Q8NBS3 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
SLC4A11Q8NBS3 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC25.56■■□□□ 1.68
SLC4A11Q8NBS3 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
SLC4A11Q8NBS3 SHF-207ENST00000560540 2062 ntTSL 5 BASIC25.56■■□□□ 1.68
SLC4A11Q8NBS3 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
SLC4A11Q8NBS3 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
SLC4A11Q8NBS3 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
SLC4A11Q8NBS3 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
SLC4A11Q8NBS3 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC25.54■■□□□ 1.68
SLC4A11Q8NBS3 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
SLC4A11Q8NBS3 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC25.53■■□□□ 1.68
SLC4A11Q8NBS3 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
SLC4A11Q8NBS3 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
SLC4A11Q8NBS3 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC25.52■■□□□ 1.68
SLC4A11Q8NBS3 AC018755.3-202ENST00000596210 929 ntBASIC25.52■■□□□ 1.68
SLC4A11Q8NBS3 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC25.52■■□□□ 1.68
SLC4A11Q8NBS3 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC25.52■■□□□ 1.68
SLC4A11Q8NBS3 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC25.52■■□□□ 1.68
SLC4A11Q8NBS3 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
SLC4A11Q8NBS3 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
SLC4A11Q8NBS3 AC004987.1-201ENST00000428627 508 ntBASIC25.51■■□□□ 1.67
SLC4A11Q8NBS3 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC25.51■■□□□ 1.67
SLC4A11Q8NBS3 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC25.51■■□□□ 1.67
SLC4A11Q8NBS3 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
SLC4A11Q8NBS3 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC25.51■■□□□ 1.67
SLC4A11Q8NBS3 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
SLC4A11Q8NBS3 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC25.51■■□□□ 1.67
SLC4A11Q8NBS3 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
SLC4A11Q8NBS3 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC25.5■■□□□ 1.67
SLC4A11Q8NBS3 SNAI3-AS1-204ENST00000567997 2048 ntBASIC25.5■■□□□ 1.67
SLC4A11Q8NBS3 MIR6765-201ENST00000614092 87 ntBASIC25.5■■□□□ 1.67
SLC4A11Q8NBS3 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC25.49■■□□□ 1.67
SLC4A11Q8NBS3 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC25.49■■□□□ 1.67
SLC4A11Q8NBS3 ATP5G2P3-201ENST00000429083 425 ntBASIC25.49■■□□□ 1.67
SLC4A11Q8NBS3 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC25.49■■□□□ 1.67
SLC4A11Q8NBS3 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC25.48■■□□□ 1.67
SLC4A11Q8NBS3 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
SLC4A11Q8NBS3 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC25.48■■□□□ 1.67
SLC4A11Q8NBS3 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC25.48■■□□□ 1.67
SLC4A11Q8NBS3 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
SLC4A11Q8NBS3 AC012354.3-201ENST00000623734 483 ntBASIC25.48■■□□□ 1.67
SLC4A11Q8NBS3 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
SLC4A11Q8NBS3 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC25.48■■□□□ 1.67
SLC4A11Q8NBS3 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
SLC4A11Q8NBS3 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
SLC4A11Q8NBS3 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
SLC4A11Q8NBS3 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
SLC4A11Q8NBS3 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC25.47■■□□□ 1.67
SLC4A11Q8NBS3 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC25.47■■□□□ 1.67
SLC4A11Q8NBS3 DUX4L18-201ENST00000553347 1267 ntBASIC25.47■■□□□ 1.67
SLC4A11Q8NBS3 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC25.47■■□□□ 1.67
SLC4A11Q8NBS3 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC25.46■■□□□ 1.67
SLC4A11Q8NBS3 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
SLC4A11Q8NBS3 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC25.46■■□□□ 1.67
SLC4A11Q8NBS3 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
SLC4A11Q8NBS3 IDNK-203ENST00000405990 629 ntTSL 2 BASIC25.46■■□□□ 1.67
SLC4A11Q8NBS3 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC25.46■■□□□ 1.67
SLC4A11Q8NBS3 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC25.46■■□□□ 1.67
SLC4A11Q8NBS3 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC25.46■■□□□ 1.67
SLC4A11Q8NBS3 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC25.46■■□□□ 1.67
SLC4A11Q8NBS3 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
SLC4A11Q8NBS3 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
SLC4A11Q8NBS3 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC25.45■■□□□ 1.66
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms