Protein–RNA interactions for Protein: Q8NBP0

TTC13, Tetratricopeptide repeat protein 13, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC13Q8NBP0 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC24.84■■□□□ 1.57
TTC13Q8NBP0 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC24.84■■□□□ 1.57
TTC13Q8NBP0 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC24.84■■□□□ 1.57
TTC13Q8NBP0 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC24.83■■□□□ 1.57
TTC13Q8NBP0 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC24.83■■□□□ 1.57
TTC13Q8NBP0 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
TTC13Q8NBP0 PFN2-211ENST00000489155 636 ntTSL 4 BASIC24.83■■□□□ 1.57
TTC13Q8NBP0 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
TTC13Q8NBP0 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC24.83■■□□□ 1.57
TTC13Q8NBP0 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC24.82■■□□□ 1.56
TTC13Q8NBP0 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
TTC13Q8NBP0 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
TTC13Q8NBP0 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
TTC13Q8NBP0 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC24.82■■□□□ 1.56
TTC13Q8NBP0 AL157400.5-201ENST00000507624 621 ntBASIC24.82■■□□□ 1.56
TTC13Q8NBP0 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC24.82■■□□□ 1.56
TTC13Q8NBP0 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
TTC13Q8NBP0 AC022211.4-201ENST00000625094 2161 ntBASIC24.81■■□□□ 1.56
TTC13Q8NBP0 AC060814.1-201ENST00000554326 538 ntBASIC24.81■■□□□ 1.56
TTC13Q8NBP0 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC24.81■■□□□ 1.56
TTC13Q8NBP0 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC24.81■■□□□ 1.56
TTC13Q8NBP0 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC24.81■■□□□ 1.56
TTC13Q8NBP0 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC24.8■■□□□ 1.56
TTC13Q8NBP0 AC025884.2-201ENST00000553429 711 ntBASIC24.8■■□□□ 1.56
TTC13Q8NBP0 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC24.8■■□□□ 1.56
TTC13Q8NBP0 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC24.8■■□□□ 1.56
TTC13Q8NBP0 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
TTC13Q8NBP0 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
TTC13Q8NBP0 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
TTC13Q8NBP0 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
TTC13Q8NBP0 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
TTC13Q8NBP0 MED17-227ENST00000640521 2047 ntTSL 5 BASIC24.78■■□□□ 1.56
TTC13Q8NBP0 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
TTC13Q8NBP0 MIR639-201ENST00000384974 98 ntBASIC24.78■■□□□ 1.56
TTC13Q8NBP0 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC24.78■■□□□ 1.56
TTC13Q8NBP0 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
TTC13Q8NBP0 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
TTC13Q8NBP0 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
TTC13Q8NBP0 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
TTC13Q8NBP0 AC097639.1-201ENST00000565519 1891 ntBASIC24.77■■□□□ 1.56
TTC13Q8NBP0 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
TTC13Q8NBP0 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC24.77■■□□□ 1.56
TTC13Q8NBP0 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC24.77■■□□□ 1.56
TTC13Q8NBP0 MIR3960-201ENST00000583311 91 ntBASIC24.77■■□□□ 1.56
TTC13Q8NBP0 MOB2-207ENST00000614710 705 ntTSL 5 BASIC24.77■■□□□ 1.56
TTC13Q8NBP0 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
TTC13Q8NBP0 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
TTC13Q8NBP0 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC24.77■■□□□ 1.56
TTC13Q8NBP0 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC24.76■■□□□ 1.55
TTC13Q8NBP0 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC24.76■■□□□ 1.55
TTC13Q8NBP0 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC24.76■■□□□ 1.55
TTC13Q8NBP0 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
TTC13Q8NBP0 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
TTC13Q8NBP0 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
TTC13Q8NBP0 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
TTC13Q8NBP0 TPT1-202ENST00000379055 948 ntTSL 2 BASIC24.75■■□□□ 1.55
TTC13Q8NBP0 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
TTC13Q8NBP0 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC24.75■■□□□ 1.55
TTC13Q8NBP0 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC24.75■■□□□ 1.55
TTC13Q8NBP0 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC24.75■■□□□ 1.55
TTC13Q8NBP0 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
TTC13Q8NBP0 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
TTC13Q8NBP0 SMPD5-203ENST00000639008 1464 ntBASIC24.74■■□□□ 1.55
TTC13Q8NBP0 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
TTC13Q8NBP0 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC24.74■■□□□ 1.55
TTC13Q8NBP0 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC24.74■■□□□ 1.55
TTC13Q8NBP0 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
TTC13Q8NBP0 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
TTC13Q8NBP0 AC092296.2-201ENST00000589470 999 ntBASIC24.72■■□□□ 1.55
TTC13Q8NBP0 AC138932.3-201ENST00000567634 1902 ntBASIC24.72■■□□□ 1.55
TTC13Q8NBP0 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
TTC13Q8NBP0 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
TTC13Q8NBP0 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC24.71■■□□□ 1.55
TTC13Q8NBP0 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
TTC13Q8NBP0 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
TTC13Q8NBP0 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
TTC13Q8NBP0 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
TTC13Q8NBP0 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC24.71■■□□□ 1.55
TTC13Q8NBP0 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
TTC13Q8NBP0 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
TTC13Q8NBP0 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
TTC13Q8NBP0 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC24.7■■□□□ 1.55
TTC13Q8NBP0 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC24.7■■□□□ 1.55
TTC13Q8NBP0 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC24.7■■□□□ 1.54
TTC13Q8NBP0 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC24.7■■□□□ 1.54
TTC13Q8NBP0 REST-210ENST00000638187 1334 ntTSL 5 BASIC24.7■■□□□ 1.54
TTC13Q8NBP0 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
TTC13Q8NBP0 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC24.7■■□□□ 1.54
TTC13Q8NBP0 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC24.7■■□□□ 1.54
TTC13Q8NBP0 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
TTC13Q8NBP0 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC24.7■■□□□ 1.54
TTC13Q8NBP0 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC24.69■■□□□ 1.54
TTC13Q8NBP0 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
TTC13Q8NBP0 AC093323.1-202ENST00000635031 2045 ntBASIC24.69■■□□□ 1.54
TTC13Q8NBP0 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC24.69■■□□□ 1.54
TTC13Q8NBP0 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
TTC13Q8NBP0 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC24.69■■□□□ 1.54
TTC13Q8NBP0 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
TTC13Q8NBP0 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC24.68■■□□□ 1.54
TTC13Q8NBP0 ECEL1P2-201ENST00000461596 1295 ntBASIC24.68■■□□□ 1.54
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms