Protein–RNA interactions for Protein: Q8N7P3

CLDN22, Claudin-22, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN22Q8N7P3 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CLDN22Q8N7P3 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CLDN22Q8N7P3 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CLDN22Q8N7P3 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC21.85■■□□□ 1.09
CLDN22Q8N7P3 AL359504.2-201ENST00000605506 1601 ntBASIC21.85■■□□□ 1.09
CLDN22Q8N7P3 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC21.85■■□□□ 1.09
CLDN22Q8N7P3 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CLDN22Q8N7P3 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
CLDN22Q8N7P3 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
CLDN22Q8N7P3 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
CLDN22Q8N7P3 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CLDN22Q8N7P3 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC21.85■■□□□ 1.09
CLDN22Q8N7P3 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CLDN22Q8N7P3 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CLDN22Q8N7P3 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC21.84■■□□□ 1.09
CLDN22Q8N7P3 PVT1-219ENST00000523427 938 ntTSL 3 BASIC21.84■■□□□ 1.09
CLDN22Q8N7P3 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC21.84■■□□□ 1.09
CLDN22Q8N7P3 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CLDN22Q8N7P3 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CLDN22Q8N7P3 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CLDN22Q8N7P3 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CLDN22Q8N7P3 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
CLDN22Q8N7P3 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CLDN22Q8N7P3 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC21.82■■□□□ 1.08
CLDN22Q8N7P3 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CLDN22Q8N7P3 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CLDN22Q8N7P3 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC21.82■■□□□ 1.08
CLDN22Q8N7P3 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CLDN22Q8N7P3 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CLDN22Q8N7P3 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC21.82■■□□□ 1.08
CLDN22Q8N7P3 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
CLDN22Q8N7P3 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CLDN22Q8N7P3 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
CLDN22Q8N7P3 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
CLDN22Q8N7P3 AC138932.3-201ENST00000567634 1902 ntBASIC21.82■■□□□ 1.08
CLDN22Q8N7P3 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CLDN22Q8N7P3 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC21.81■■□□□ 1.08
CLDN22Q8N7P3 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CLDN22Q8N7P3 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CLDN22Q8N7P3 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CLDN22Q8N7P3 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC21.8■■□□□ 1.08
CLDN22Q8N7P3 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
CLDN22Q8N7P3 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CLDN22Q8N7P3 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC21.8■■□□□ 1.08
CLDN22Q8N7P3 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CLDN22Q8N7P3 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC21.79■■□□□ 1.08
CLDN22Q8N7P3 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CLDN22Q8N7P3 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
CLDN22Q8N7P3 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CLDN22Q8N7P3 AL139125.2-201ENST00000623134 1869 ntBASIC21.79■■□□□ 1.08
CLDN22Q8N7P3 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CLDN22Q8N7P3 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC21.79■■□□□ 1.08
CLDN22Q8N7P3 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CLDN22Q8N7P3 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CLDN22Q8N7P3 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CLDN22Q8N7P3 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CLDN22Q8N7P3 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CLDN22Q8N7P3 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
CLDN22Q8N7P3 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CLDN22Q8N7P3 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
CLDN22Q8N7P3 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC21.77■■□□□ 1.08
CLDN22Q8N7P3 RPS2-202ENST00000526522 924 ntTSL 2 BASIC21.77■■□□□ 1.08
CLDN22Q8N7P3 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC21.77■■□□□ 1.08
CLDN22Q8N7P3 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CLDN22Q8N7P3 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CLDN22Q8N7P3 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CLDN22Q8N7P3 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CLDN22Q8N7P3 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC21.76■■□□□ 1.07
CLDN22Q8N7P3 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CLDN22Q8N7P3 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CLDN22Q8N7P3 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CLDN22Q8N7P3 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC21.75■■□□□ 1.07
CLDN22Q8N7P3 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC21.75■■□□□ 1.07
CLDN22Q8N7P3 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CLDN22Q8N7P3 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CLDN22Q8N7P3 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC21.75■■□□□ 1.07
CLDN22Q8N7P3 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC21.74■■□□□ 1.07
CLDN22Q8N7P3 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
CLDN22Q8N7P3 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
CLDN22Q8N7P3 PREB-202ENST00000406567 1910 ntTSL 5 BASIC21.74■■□□□ 1.07
CLDN22Q8N7P3 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC21.74■■□□□ 1.07
CLDN22Q8N7P3 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CLDN22Q8N7P3 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CLDN22Q8N7P3 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CLDN22Q8N7P3 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CLDN22Q8N7P3 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
CLDN22Q8N7P3 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CLDN22Q8N7P3 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CLDN22Q8N7P3 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC21.73■■□□□ 1.07
CLDN22Q8N7P3 AC126177.7-201ENST00000547904 679 ntBASIC21.73■■□□□ 1.07
CLDN22Q8N7P3 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
CLDN22Q8N7P3 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
CLDN22Q8N7P3 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC21.73■■□□□ 1.07
CLDN22Q8N7P3 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CLDN22Q8N7P3 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CLDN22Q8N7P3 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC21.72■■□□□ 1.07
CLDN22Q8N7P3 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CLDN22Q8N7P3 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
CLDN22Q8N7P3 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CLDN22Q8N7P3 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 117.6 ms