Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC23.89■■□□□ 1.41
TRAM1L1Q8N609 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC23.88■■□□□ 1.41
TRAM1L1Q8N609 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
TRAM1L1Q8N609 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
TRAM1L1Q8N609 KRT18P10-201ENST00000388836 1287 ntBASIC23.88■■□□□ 1.41
TRAM1L1Q8N609 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC23.88■■□□□ 1.41
TRAM1L1Q8N609 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC23.88■■□□□ 1.41
TRAM1L1Q8N609 ERN1-208ENST00000606895 2068 ntBASIC23.88■■□□□ 1.41
TRAM1L1Q8N609 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
TRAM1L1Q8N609 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
TRAM1L1Q8N609 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
TRAM1L1Q8N609 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC23.87■■□□□ 1.41
TRAM1L1Q8N609 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
TRAM1L1Q8N609 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC23.87■■□□□ 1.41
TRAM1L1Q8N609 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
TRAM1L1Q8N609 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC23.87■■□□□ 1.41
TRAM1L1Q8N609 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC23.87■■□□□ 1.41
TRAM1L1Q8N609 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC23.87■■□□□ 1.41
TRAM1L1Q8N609 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC23.86■■□□□ 1.41
TRAM1L1Q8N609 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
TRAM1L1Q8N609 AC091060.1-201ENST00000623524 1766 ntBASIC23.86■■□□□ 1.41
TRAM1L1Q8N609 AC010501.1-201ENST00000606270 1962 ntBASIC23.86■■□□□ 1.41
TRAM1L1Q8N609 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
TRAM1L1Q8N609 IDNK-203ENST00000405990 629 ntTSL 2 BASIC23.86■■□□□ 1.41
TRAM1L1Q8N609 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
TRAM1L1Q8N609 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC23.86■■□□□ 1.41
TRAM1L1Q8N609 DUX4L18-201ENST00000553347 1267 ntBASIC23.86■■□□□ 1.41
TRAM1L1Q8N609 AL033527.3-201ENST00000566366 1196 ntBASIC23.86■■□□□ 1.41
TRAM1L1Q8N609 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
TRAM1L1Q8N609 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC23.86■■□□□ 1.41
TRAM1L1Q8N609 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC23.86■■□□□ 1.41
TRAM1L1Q8N609 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC23.86■■□□□ 1.41
TRAM1L1Q8N609 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
TRAM1L1Q8N609 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC23.85■■□□□ 1.41
TRAM1L1Q8N609 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
TRAM1L1Q8N609 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
TRAM1L1Q8N609 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC23.84■■□□□ 1.41
TRAM1L1Q8N609 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC23.84■■□□□ 1.41
TRAM1L1Q8N609 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC23.84■■□□□ 1.41
TRAM1L1Q8N609 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC23.84■■□□□ 1.41
TRAM1L1Q8N609 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
TRAM1L1Q8N609 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
TRAM1L1Q8N609 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
TRAM1L1Q8N609 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC23.84■■□□□ 1.41
TRAM1L1Q8N609 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC23.84■■□□□ 1.41
TRAM1L1Q8N609 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
TRAM1L1Q8N609 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
TRAM1L1Q8N609 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
TRAM1L1Q8N609 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC23.83■■□□□ 1.41
TRAM1L1Q8N609 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC23.83■■□□□ 1.41
TRAM1L1Q8N609 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC23.83■■□□□ 1.41
TRAM1L1Q8N609 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC23.83■■□□□ 1.4
TRAM1L1Q8N609 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC23.82■■□□□ 1.4
TRAM1L1Q8N609 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
TRAM1L1Q8N609 DUSP8P4-201ENST00000399538 1761 ntBASIC23.82■■□□□ 1.4
TRAM1L1Q8N609 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
TRAM1L1Q8N609 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
TRAM1L1Q8N609 GUK1-208ENST00000366728 842 ntTSL 2 BASIC23.81■■□□□ 1.4
TRAM1L1Q8N609 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
TRAM1L1Q8N609 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
TRAM1L1Q8N609 AC145676.1-201ENST00000514988 2004 ntBASIC23.81■■□□□ 1.4
TRAM1L1Q8N609 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
TRAM1L1Q8N609 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
TRAM1L1Q8N609 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
TRAM1L1Q8N609 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC23.8■■□□□ 1.4
TRAM1L1Q8N609 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC23.8■■□□□ 1.4
TRAM1L1Q8N609 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC23.8■■□□□ 1.4
TRAM1L1Q8N609 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
TRAM1L1Q8N609 AC096887.2-201ENST00000623443 1957 ntBASIC23.8■■□□□ 1.4
TRAM1L1Q8N609 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
TRAM1L1Q8N609 SNAI3-AS1-204ENST00000567997 2048 ntBASIC23.79■■□□□ 1.4
TRAM1L1Q8N609 RPS2P7-201ENST00000447334 885 ntBASIC23.79■■□□□ 1.4
TRAM1L1Q8N609 HYI-210ENST00000486909 905 ntTSL 5 BASIC23.79■■□□□ 1.4
TRAM1L1Q8N609 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
TRAM1L1Q8N609 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC23.78■■□□□ 1.4
TRAM1L1Q8N609 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
TRAM1L1Q8N609 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
TRAM1L1Q8N609 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
TRAM1L1Q8N609 AC087393.1-201ENST00000582896 145 ntBASIC23.78■■□□□ 1.4
TRAM1L1Q8N609 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
TRAM1L1Q8N609 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC23.78■■□□□ 1.4
TRAM1L1Q8N609 CREM-210ENST00000374721 2020 ntTSL 5 BASIC23.77■■□□□ 1.4
TRAM1L1Q8N609 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
TRAM1L1Q8N609 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
TRAM1L1Q8N609 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
TRAM1L1Q8N609 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC23.77■■□□□ 1.4
TRAM1L1Q8N609 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC23.77■■□□□ 1.4
TRAM1L1Q8N609 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC23.77■■□□□ 1.4
TRAM1L1Q8N609 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
TRAM1L1Q8N609 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC23.76■■□□□ 1.39
TRAM1L1Q8N609 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
TRAM1L1Q8N609 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC23.76■■□□□ 1.39
TRAM1L1Q8N609 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
TRAM1L1Q8N609 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC23.76■■□□□ 1.39
TRAM1L1Q8N609 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC23.76■■□□□ 1.39
TRAM1L1Q8N609 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC23.76■■□□□ 1.39
TRAM1L1Q8N609 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC23.76■■□□□ 1.39
TRAM1L1Q8N609 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
TRAM1L1Q8N609 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
TRAM1L1Q8N609 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC23.75■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms