Protein–RNA interactions for Protein: Q8N584

TTC39C, Tetratricopeptide repeat protein 39C, humanhuman

Predictions only

Length 583 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39CQ8N584 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
TTC39CQ8N584 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
TTC39CQ8N584 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC25.64■■□□□ 1.69
TTC39CQ8N584 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC25.64■■□□□ 1.69
TTC39CQ8N584 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC25.64■■□□□ 1.69
TTC39CQ8N584 ERN1-208ENST00000606895 2068 ntBASIC25.64■■□□□ 1.69
TTC39CQ8N584 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC25.63■■□□□ 1.69
TTC39CQ8N584 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC25.63■■□□□ 1.69
TTC39CQ8N584 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC25.63■■□□□ 1.69
TTC39CQ8N584 AC129492.7-201ENST00000622992 756 ntBASIC25.63■■□□□ 1.69
TTC39CQ8N584 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
TTC39CQ8N584 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC25.63■■□□□ 1.69
TTC39CQ8N584 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
TTC39CQ8N584 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC25.63■■□□□ 1.69
TTC39CQ8N584 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
TTC39CQ8N584 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC25.62■■□□□ 1.69
TTC39CQ8N584 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC25.62■■□□□ 1.69
TTC39CQ8N584 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
TTC39CQ8N584 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
TTC39CQ8N584 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC25.62■■□□□ 1.69
TTC39CQ8N584 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC25.61■■□□□ 1.69
TTC39CQ8N584 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC25.61■■□□□ 1.69
TTC39CQ8N584 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC25.61■■□□□ 1.69
TTC39CQ8N584 MIR6765-201ENST00000614092 87 ntBASIC25.61■■□□□ 1.69
TTC39CQ8N584 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
TTC39CQ8N584 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC25.6■■□□□ 1.69
TTC39CQ8N584 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC25.6■■□□□ 1.69
TTC39CQ8N584 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
TTC39CQ8N584 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC25.6■■□□□ 1.69
TTC39CQ8N584 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC25.6■■□□□ 1.69
TTC39CQ8N584 SNAI3-AS1-204ENST00000567997 2048 ntBASIC25.6■■□□□ 1.69
TTC39CQ8N584 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC25.6■■□□□ 1.69
TTC39CQ8N584 DUX4L9-201ENST00000449051 1259 ntBASIC25.6■■□□□ 1.69
TTC39CQ8N584 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
TTC39CQ8N584 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
TTC39CQ8N584 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
TTC39CQ8N584 IDNK-203ENST00000405990 629 ntTSL 2 BASIC25.59■■□□□ 1.69
TTC39CQ8N584 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC25.59■■□□□ 1.69
TTC39CQ8N584 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
TTC39CQ8N584 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
TTC39CQ8N584 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
TTC39CQ8N584 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
TTC39CQ8N584 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
TTC39CQ8N584 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
TTC39CQ8N584 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
TTC39CQ8N584 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
TTC39CQ8N584 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
TTC39CQ8N584 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC25.57■■□□□ 1.68
TTC39CQ8N584 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
TTC39CQ8N584 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC25.57■■□□□ 1.68
TTC39CQ8N584 AC096887.2-201ENST00000623443 1957 ntBASIC25.57■■□□□ 1.68
TTC39CQ8N584 SPCS2P3-201ENST00000500401 656 ntBASIC25.57■■□□□ 1.68
TTC39CQ8N584 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
TTC39CQ8N584 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
TTC39CQ8N584 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC25.57■■□□□ 1.68
TTC39CQ8N584 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
TTC39CQ8N584 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC25.55■■□□□ 1.68
TTC39CQ8N584 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC25.55■■□□□ 1.68
TTC39CQ8N584 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
TTC39CQ8N584 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC25.55■■□□□ 1.68
TTC39CQ8N584 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC25.55■■□□□ 1.68
TTC39CQ8N584 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC25.55■■□□□ 1.68
TTC39CQ8N584 AC012354.3-201ENST00000623734 483 ntBASIC25.55■■□□□ 1.68
TTC39CQ8N584 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC25.55■■□□□ 1.68
TTC39CQ8N584 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
TTC39CQ8N584 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
TTC39CQ8N584 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC25.54■■□□□ 1.68
TTC39CQ8N584 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC25.54■■□□□ 1.68
TTC39CQ8N584 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
TTC39CQ8N584 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC25.53■■□□□ 1.68
TTC39CQ8N584 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC25.53■■□□□ 1.68
TTC39CQ8N584 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC25.53■■□□□ 1.68
TTC39CQ8N584 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC25.52■■□□□ 1.68
TTC39CQ8N584 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC25.52■■□□□ 1.68
TTC39CQ8N584 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
TTC39CQ8N584 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
TTC39CQ8N584 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC25.51■■□□□ 1.67
TTC39CQ8N584 AC097639.1-201ENST00000565519 1891 ntBASIC25.51■■□□□ 1.67
TTC39CQ8N584 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
TTC39CQ8N584 ATP5G2P3-201ENST00000429083 425 ntBASIC25.51■■□□□ 1.67
TTC39CQ8N584 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC25.51■■□□□ 1.67
TTC39CQ8N584 RPS2P7-201ENST00000447334 885 ntBASIC25.51■■□□□ 1.67
TTC39CQ8N584 HYI-210ENST00000486909 905 ntTSL 5 BASIC25.51■■□□□ 1.67
TTC39CQ8N584 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
TTC39CQ8N584 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
TTC39CQ8N584 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
TTC39CQ8N584 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC25.49■■□□□ 1.67
TTC39CQ8N584 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC25.49■■□□□ 1.67
TTC39CQ8N584 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC25.49■■□□□ 1.67
TTC39CQ8N584 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC25.49■■□□□ 1.67
TTC39CQ8N584 TSPY13P-201ENST00000338964 914 ntBASIC25.49■■□□□ 1.67
TTC39CQ8N584 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC25.49■■□□□ 1.67
TTC39CQ8N584 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC25.49■■□□□ 1.67
TTC39CQ8N584 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC25.49■■□□□ 1.67
TTC39CQ8N584 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC25.49■■□□□ 1.67
TTC39CQ8N584 AC004987.1-201ENST00000428627 508 ntBASIC25.49■■□□□ 1.67
TTC39CQ8N584 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC25.49■■□□□ 1.67
TTC39CQ8N584 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC25.49■■□□□ 1.67
TTC39CQ8N584 AC087393.1-201ENST00000582896 145 ntBASIC25.49■■□□□ 1.67
TTC39CQ8N584 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms