Protein–RNA interactions for Protein: Q8N2S1

LTBP4, Latent-transforming growth factor beta-binding protein 4, humanhuman

Predictions only

Length 1,624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4Q8N2S1 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC34.62■■■■□ 3.13
LTBP4Q8N2S1 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC34.62■■■■□ 3.13
LTBP4Q8N2S1 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC34.62■■■■□ 3.13
LTBP4Q8N2S1 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC34.62■■■■□ 3.13
LTBP4Q8N2S1 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC34.61■■■■□ 3.13
LTBP4Q8N2S1 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC34.61■■■■□ 3.13
LTBP4Q8N2S1 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC34.61■■■■□ 3.13
LTBP4Q8N2S1 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC34.6■■■■□ 3.13
LTBP4Q8N2S1 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC34.6■■■■□ 3.13
LTBP4Q8N2S1 MIR4281-201ENST00000580852 62 ntBASIC34.6■■■■□ 3.13
LTBP4Q8N2S1 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC34.59■■■■□ 3.13
LTBP4Q8N2S1 SENP5-202ENST00000419026 973 ntTSL 3 BASIC34.59■■■■□ 3.13
LTBP4Q8N2S1 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC34.59■■■■□ 3.13
LTBP4Q8N2S1 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC34.59■■■■□ 3.13
LTBP4Q8N2S1 EXOG-217ENST00000630638 197 ntTSL 5 BASIC34.59■■■■□ 3.13
LTBP4Q8N2S1 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC34.58■■■■□ 3.13
LTBP4Q8N2S1 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC34.58■■■■□ 3.13
LTBP4Q8N2S1 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC34.58■■■■□ 3.13
LTBP4Q8N2S1 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC34.57■■■■□ 3.12
LTBP4Q8N2S1 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC34.57■■■■□ 3.12
LTBP4Q8N2S1 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC34.56■■■■□ 3.12
LTBP4Q8N2S1 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC34.56■■■■□ 3.12
LTBP4Q8N2S1 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC34.56■■■■□ 3.12
LTBP4Q8N2S1 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC34.55■■■■□ 3.12
LTBP4Q8N2S1 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC34.55■■■■□ 3.12
LTBP4Q8N2S1 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC34.55■■■■□ 3.12
LTBP4Q8N2S1 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC34.54■■■■□ 3.12
LTBP4Q8N2S1 EDA-201ENST00000338901 1233 ntBASIC34.54■■■■□ 3.12
LTBP4Q8N2S1 HYI-206ENST00000372434 1025 ntTSL 5 BASIC34.54■■■■□ 3.12
LTBP4Q8N2S1 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC34.54■■■■□ 3.12
LTBP4Q8N2S1 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC34.54■■■■□ 3.12
LTBP4Q8N2S1 AK3-203ENST00000447596 705 ntTSL 2 BASIC34.54■■■■□ 3.12
LTBP4Q8N2S1 DENND3-207ENST00000518347 850 ntTSL 2 BASIC34.54■■■■□ 3.12
LTBP4Q8N2S1 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC34.54■■■■□ 3.12
LTBP4Q8N2S1 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC34.54■■■■□ 3.12
LTBP4Q8N2S1 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC34.53■■■■□ 3.12
LTBP4Q8N2S1 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC34.53■■■■□ 3.12
LTBP4Q8N2S1 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC34.53■■■■□ 3.12
LTBP4Q8N2S1 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC34.53■■■■□ 3.12
LTBP4Q8N2S1 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC34.53■■■■□ 3.12
LTBP4Q8N2S1 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC34.53■■■■□ 3.12
LTBP4Q8N2S1 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC34.53■■■■□ 3.12
LTBP4Q8N2S1 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC34.53■■■■□ 3.12
LTBP4Q8N2S1 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC34.53■■■■□ 3.12
LTBP4Q8N2S1 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC34.52■■■■□ 3.12
LTBP4Q8N2S1 AL136162.1-201ENST00000607711 1078 ntBASIC34.52■■■■□ 3.12
LTBP4Q8N2S1 AC100797.4-201ENST00000631653 1827 ntBASIC34.52■■■■□ 3.12
LTBP4Q8N2S1 UNC93B3-201ENST00000308076 687 ntBASIC34.52■■■■□ 3.12
LTBP4Q8N2S1 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC34.52■■■■□ 3.12
LTBP4Q8N2S1 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC34.52■■■■□ 3.12
LTBP4Q8N2S1 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC34.52■■■■□ 3.12
LTBP4Q8N2S1 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC34.52■■■■□ 3.12
LTBP4Q8N2S1 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC34.51■■■■□ 3.11
LTBP4Q8N2S1 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC34.5■■■■□ 3.11
LTBP4Q8N2S1 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC34.5■■■■□ 3.11
LTBP4Q8N2S1 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC34.5■■■■□ 3.11
LTBP4Q8N2S1 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC34.5■■■■□ 3.11
LTBP4Q8N2S1 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC34.5■■■■□ 3.11
LTBP4Q8N2S1 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC34.49■■■■□ 3.11
LTBP4Q8N2S1 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC34.49■■■■□ 3.11
LTBP4Q8N2S1 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC34.49■■■■□ 3.11
LTBP4Q8N2S1 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC34.49■■■■□ 3.11
LTBP4Q8N2S1 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC34.49■■■■□ 3.11
LTBP4Q8N2S1 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC34.48■■■■□ 3.11
LTBP4Q8N2S1 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC34.48■■■■□ 3.11
LTBP4Q8N2S1 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC34.48■■■■□ 3.11
LTBP4Q8N2S1 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC34.48■■■■□ 3.11
LTBP4Q8N2S1 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC34.48■■■■□ 3.11
LTBP4Q8N2S1 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC34.48■■■■□ 3.11
LTBP4Q8N2S1 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC34.47■■■■□ 3.11
LTBP4Q8N2S1 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC34.47■■■■□ 3.11
LTBP4Q8N2S1 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC34.47■■■■□ 3.11
LTBP4Q8N2S1 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC34.47■■■■□ 3.11
LTBP4Q8N2S1 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC34.46■■■■□ 3.11
LTBP4Q8N2S1 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC34.46■■■■□ 3.11
LTBP4Q8N2S1 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC34.45■■■■□ 3.11
LTBP4Q8N2S1 AL355001.2-201ENST00000620617 1191 ntBASIC34.45■■■■□ 3.11
LTBP4Q8N2S1 AP004833.2-201ENST00000532228 1454 ntBASIC34.45■■■■□ 3.1
LTBP4Q8N2S1 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC34.45■■■■□ 3.1
LTBP4Q8N2S1 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC34.44■■■■□ 3.1
LTBP4Q8N2S1 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC34.43■■■■□ 3.1
LTBP4Q8N2S1 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC34.43■■■■□ 3.1
LTBP4Q8N2S1 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC34.42■■■■□ 3.1
LTBP4Q8N2S1 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC34.42■■■■□ 3.1
LTBP4Q8N2S1 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC34.42■■■■□ 3.1
LTBP4Q8N2S1 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC34.41■■■■□ 3.1
LTBP4Q8N2S1 AL136967.2-201ENST00000623968 743 ntBASIC34.41■■■■□ 3.1
LTBP4Q8N2S1 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC34.41■■■■□ 3.1
LTBP4Q8N2S1 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC34.41■■■■□ 3.1
LTBP4Q8N2S1 AC024257.2-201ENST00000549699 147 ntBASIC34.41■■■■□ 3.1
LTBP4Q8N2S1 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC34.4■■■■□ 3.1
LTBP4Q8N2S1 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC34.4■■■■□ 3.1
LTBP4Q8N2S1 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC34.4■■■■□ 3.1
LTBP4Q8N2S1 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC34.4■■■■□ 3.1
LTBP4Q8N2S1 AF213884.3-201ENST00000563833 479 ntBASIC34.4■■■■□ 3.1
LTBP4Q8N2S1 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC34.39■■■■□ 3.1
LTBP4Q8N2S1 MIR939-201ENST00000401314 82 ntBASIC34.39■■■■□ 3.1
LTBP4Q8N2S1 RBM38-205ENST00000440234 686 ntTSL 2 BASIC34.39■■■■□ 3.1
LTBP4Q8N2S1 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC34.39■■■■□ 3.1
LTBP4Q8N2S1 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC34.38■■■■□ 3.09
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms