Protein–RNA interactions for Protein: Q8IYE0

CCDC146, Coiled-coil domain-containing protein 146, humanhuman

Predictions only

Length 955 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC146Q8IYE0 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC31.97■■■□□ 2.71
CCDC146Q8IYE0 DUSP8P4-201ENST00000399538 1761 ntBASIC31.96■■■□□ 2.71
CCDC146Q8IYE0 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC31.96■■■□□ 2.71
CCDC146Q8IYE0 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC31.96■■■□□ 2.71
CCDC146Q8IYE0 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC31.96■■■□□ 2.71
CCDC146Q8IYE0 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC31.96■■■□□ 2.71
CCDC146Q8IYE0 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC31.96■■■□□ 2.71
CCDC146Q8IYE0 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
CCDC146Q8IYE0 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
CCDC146Q8IYE0 DUX4L9-201ENST00000449051 1259 ntBASIC31.95■■■□□ 2.71
CCDC146Q8IYE0 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC31.95■■■□□ 2.71
CCDC146Q8IYE0 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC31.95■■■□□ 2.71
CCDC146Q8IYE0 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
CCDC146Q8IYE0 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC31.94■■■□□ 2.7
CCDC146Q8IYE0 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC31.94■■■□□ 2.7
CCDC146Q8IYE0 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC31.94■■■□□ 2.7
CCDC146Q8IYE0 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC31.94■■■□□ 2.7
CCDC146Q8IYE0 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
CCDC146Q8IYE0 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
CCDC146Q8IYE0 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC31.94■■■□□ 2.7
CCDC146Q8IYE0 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
CCDC146Q8IYE0 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC31.93■■■□□ 2.7
CCDC146Q8IYE0 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC31.93■■■□□ 2.7
CCDC146Q8IYE0 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC31.93■■■□□ 2.7
CCDC146Q8IYE0 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC31.92■■■□□ 2.7
CCDC146Q8IYE0 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC31.92■■■□□ 2.7
CCDC146Q8IYE0 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
CCDC146Q8IYE0 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
CCDC146Q8IYE0 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
CCDC146Q8IYE0 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
CCDC146Q8IYE0 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC31.91■■■□□ 2.7
CCDC146Q8IYE0 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
CCDC146Q8IYE0 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
CCDC146Q8IYE0 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC31.9■■■□□ 2.7
CCDC146Q8IYE0 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC31.9■■■□□ 2.7
CCDC146Q8IYE0 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC31.9■■■□□ 2.7
CCDC146Q8IYE0 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC31.89■■■□□ 2.7
CCDC146Q8IYE0 SHF-207ENST00000560540 2062 ntTSL 5 BASIC31.89■■■□□ 2.7
CCDC146Q8IYE0 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
CCDC146Q8IYE0 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
CCDC146Q8IYE0 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.69
CCDC146Q8IYE0 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC31.88■■■□□ 2.69
CCDC146Q8IYE0 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC31.88■■■□□ 2.69
CCDC146Q8IYE0 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC31.88■■■□□ 2.69
CCDC146Q8IYE0 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC31.88■■■□□ 2.69
CCDC146Q8IYE0 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
CCDC146Q8IYE0 DUX4L18-201ENST00000553347 1267 ntBASIC31.88■■■□□ 2.69
CCDC146Q8IYE0 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC31.88■■■□□ 2.69
CCDC146Q8IYE0 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
CCDC146Q8IYE0 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC31.86■■■□□ 2.69
CCDC146Q8IYE0 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
CCDC146Q8IYE0 AC004987.1-201ENST00000428627 508 ntBASIC31.86■■■□□ 2.69
CCDC146Q8IYE0 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
CCDC146Q8IYE0 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
CCDC146Q8IYE0 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
CCDC146Q8IYE0 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
CCDC146Q8IYE0 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
CCDC146Q8IYE0 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC31.84■■■□□ 2.69
CCDC146Q8IYE0 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
CCDC146Q8IYE0 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC31.84■■■□□ 2.69
CCDC146Q8IYE0 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.69
CCDC146Q8IYE0 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC31.82■■■□□ 2.68
CCDC146Q8IYE0 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC31.81■■■□□ 2.68
CCDC146Q8IYE0 ATP5G2P3-201ENST00000429083 425 ntBASIC31.81■■■□□ 2.68
CCDC146Q8IYE0 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC31.81■■■□□ 2.68
CCDC146Q8IYE0 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC31.81■■■□□ 2.68
CCDC146Q8IYE0 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC31.81■■■□□ 2.68
CCDC146Q8IYE0 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC31.81■■■□□ 2.68
CCDC146Q8IYE0 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
CCDC146Q8IYE0 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC31.8■■■□□ 2.68
CCDC146Q8IYE0 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC31.8■■■□□ 2.68
CCDC146Q8IYE0 AL033527.3-201ENST00000566366 1196 ntBASIC31.8■■■□□ 2.68
CCDC146Q8IYE0 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC31.8■■■□□ 2.68
CCDC146Q8IYE0 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
CCDC146Q8IYE0 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
CCDC146Q8IYE0 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC31.79■■■□□ 2.68
CCDC146Q8IYE0 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
CCDC146Q8IYE0 AC012354.3-201ENST00000623734 483 ntBASIC31.79■■■□□ 2.68
CCDC146Q8IYE0 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC31.79■■■□□ 2.68
CCDC146Q8IYE0 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
CCDC146Q8IYE0 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC31.78■■■□□ 2.68
CCDC146Q8IYE0 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC31.78■■■□□ 2.68
CCDC146Q8IYE0 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
CCDC146Q8IYE0 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC31.78■■■□□ 2.68
CCDC146Q8IYE0 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC31.78■■■□□ 2.68
CCDC146Q8IYE0 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC31.78■■■□□ 2.68
CCDC146Q8IYE0 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC31.78■■■□□ 2.68
CCDC146Q8IYE0 AC018755.3-202ENST00000596210 929 ntBASIC31.78■■■□□ 2.68
CCDC146Q8IYE0 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC31.78■■■□□ 2.68
CCDC146Q8IYE0 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC31.78■■■□□ 2.68
CCDC146Q8IYE0 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC31.78■■■□□ 2.68
CCDC146Q8IYE0 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC31.78■■■□□ 2.68
CCDC146Q8IYE0 MIR6765-201ENST00000614092 87 ntBASIC31.77■■■□□ 2.68
CCDC146Q8IYE0 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC31.77■■■□□ 2.68
CCDC146Q8IYE0 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
CCDC146Q8IYE0 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC31.76■■■□□ 2.68
CCDC146Q8IYE0 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC31.76■■■□□ 2.68
CCDC146Q8IYE0 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
CCDC146Q8IYE0 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC31.76■■■□□ 2.67
CCDC146Q8IYE0 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms