Protein–RNA interactions for Protein: Q8IWY4

SCUBE1, Signal peptide, CUB and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE1Q8IWY4 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC23.6■■□□□ 1.37
SCUBE1Q8IWY4 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC23.6■■□□□ 1.37
SCUBE1Q8IWY4 AL139125.2-201ENST00000623134 1869 ntBASIC23.6■■□□□ 1.37
SCUBE1Q8IWY4 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
SCUBE1Q8IWY4 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SCUBE1Q8IWY4 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SCUBE1Q8IWY4 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC23.58■■□□□ 1.37
SCUBE1Q8IWY4 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC23.58■■□□□ 1.37
SCUBE1Q8IWY4 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.37
SCUBE1Q8IWY4 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
SCUBE1Q8IWY4 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
SCUBE1Q8IWY4 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC23.58■■□□□ 1.37
SCUBE1Q8IWY4 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC23.58■■□□□ 1.37
SCUBE1Q8IWY4 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
SCUBE1Q8IWY4 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
SCUBE1Q8IWY4 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
SCUBE1Q8IWY4 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
SCUBE1Q8IWY4 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
SCUBE1Q8IWY4 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC23.57■■□□□ 1.36
SCUBE1Q8IWY4 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
SCUBE1Q8IWY4 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
SCUBE1Q8IWY4 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
SCUBE1Q8IWY4 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
SCUBE1Q8IWY4 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC23.56■■□□□ 1.36
SCUBE1Q8IWY4 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
SCUBE1Q8IWY4 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
SCUBE1Q8IWY4 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC23.56■■□□□ 1.36
SCUBE1Q8IWY4 AC142472.1-201ENST00000612013 1741 ntBASIC23.56■■□□□ 1.36
SCUBE1Q8IWY4 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
SCUBE1Q8IWY4 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC23.55■■□□□ 1.36
SCUBE1Q8IWY4 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC23.55■■□□□ 1.36
SCUBE1Q8IWY4 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
SCUBE1Q8IWY4 SRP68-213ENST00000629930 165 ntTSL 5 BASIC23.55■■□□□ 1.36
SCUBE1Q8IWY4 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
SCUBE1Q8IWY4 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
SCUBE1Q8IWY4 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
SCUBE1Q8IWY4 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC23.54■■□□□ 1.36
SCUBE1Q8IWY4 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC23.54■■□□□ 1.36
SCUBE1Q8IWY4 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
SCUBE1Q8IWY4 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
SCUBE1Q8IWY4 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
SCUBE1Q8IWY4 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC23.54■■□□□ 1.36
SCUBE1Q8IWY4 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC23.54■■□□□ 1.36
SCUBE1Q8IWY4 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
SCUBE1Q8IWY4 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
SCUBE1Q8IWY4 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
SCUBE1Q8IWY4 AC138932.3-201ENST00000567634 1902 ntBASIC23.53■■□□□ 1.36
SCUBE1Q8IWY4 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
SCUBE1Q8IWY4 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC23.53■■□□□ 1.36
SCUBE1Q8IWY4 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
SCUBE1Q8IWY4 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
SCUBE1Q8IWY4 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC23.53■■□□□ 1.36
SCUBE1Q8IWY4 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
SCUBE1Q8IWY4 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC23.52■■□□□ 1.36
SCUBE1Q8IWY4 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
SCUBE1Q8IWY4 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC23.52■■□□□ 1.36
SCUBE1Q8IWY4 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC23.52■■□□□ 1.36
SCUBE1Q8IWY4 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
SCUBE1Q8IWY4 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
SCUBE1Q8IWY4 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC23.51■■□□□ 1.35
SCUBE1Q8IWY4 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
SCUBE1Q8IWY4 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC23.51■■□□□ 1.35
SCUBE1Q8IWY4 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC23.51■■□□□ 1.35
SCUBE1Q8IWY4 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC23.51■■□□□ 1.35
SCUBE1Q8IWY4 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC23.51■■□□□ 1.35
SCUBE1Q8IWY4 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
SCUBE1Q8IWY4 AC022211.4-201ENST00000625094 2161 ntBASIC23.51■■□□□ 1.35
SCUBE1Q8IWY4 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC23.51■■□□□ 1.35
SCUBE1Q8IWY4 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC23.51■■□□□ 1.35
SCUBE1Q8IWY4 AC010501.1-201ENST00000606270 1962 ntBASIC23.51■■□□□ 1.35
SCUBE1Q8IWY4 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
SCUBE1Q8IWY4 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC23.5■■□□□ 1.35
SCUBE1Q8IWY4 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
SCUBE1Q8IWY4 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC23.5■■□□□ 1.35
SCUBE1Q8IWY4 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
SCUBE1Q8IWY4 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC23.5■■□□□ 1.35
SCUBE1Q8IWY4 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
SCUBE1Q8IWY4 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
SCUBE1Q8IWY4 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC23.49■■□□□ 1.35
SCUBE1Q8IWY4 AC012676.1-201ENST00000574705 1949 ntBASIC23.49■■□□□ 1.35
SCUBE1Q8IWY4 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
SCUBE1Q8IWY4 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
SCUBE1Q8IWY4 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC23.49■■□□□ 1.35
SCUBE1Q8IWY4 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
SCUBE1Q8IWY4 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
SCUBE1Q8IWY4 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
SCUBE1Q8IWY4 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC23.49■■□□□ 1.35
SCUBE1Q8IWY4 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
SCUBE1Q8IWY4 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
SCUBE1Q8IWY4 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC23.48■■□□□ 1.35
SCUBE1Q8IWY4 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC23.48■■□□□ 1.35
SCUBE1Q8IWY4 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
SCUBE1Q8IWY4 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC23.47■■□□□ 1.35
SCUBE1Q8IWY4 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
SCUBE1Q8IWY4 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
SCUBE1Q8IWY4 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC23.46■■□□□ 1.35
SCUBE1Q8IWY4 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
SCUBE1Q8IWY4 TPT1-202ENST00000379055 948 ntTSL 2 BASIC23.46■■□□□ 1.35
SCUBE1Q8IWY4 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
SCUBE1Q8IWY4 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms