Protein–RNA interactions for Protein: Q8IWV7

UBR1, E3 ubiquitin-protein ligase UBR1, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1Q8IWV7 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC35.09■■■■□ 3.21
UBR1Q8IWV7 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC35.08■■■■□ 3.21
UBR1Q8IWV7 RPP21-222ENST00000433076 577 ntTSL 2 BASIC35.08■■■■□ 3.21
UBR1Q8IWV7 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC35.08■■■■□ 3.21
UBR1Q8IWV7 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC35.07■■■■□ 3.2
UBR1Q8IWV7 AC120024.1-201ENST00000562672 995 ntBASIC35.06■■■■□ 3.2
UBR1Q8IWV7 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC35.06■■■■□ 3.2
UBR1Q8IWV7 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC35.06■■■■□ 3.2
UBR1Q8IWV7 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC35.06■■■■□ 3.2
UBR1Q8IWV7 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC35.06■■■■□ 3.2
UBR1Q8IWV7 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC35.06■■■■□ 3.2
UBR1Q8IWV7 AC092028.1-203ENST00000608262 953 ntBASIC35.06■■■■□ 3.2
UBR1Q8IWV7 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC35.05■■■■□ 3.2
UBR1Q8IWV7 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC35.05■■■■□ 3.2
UBR1Q8IWV7 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC35.05■■■■□ 3.2
UBR1Q8IWV7 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC35.05■■■■□ 3.2
UBR1Q8IWV7 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC35.04■■■■□ 3.2
UBR1Q8IWV7 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC35.04■■■■□ 3.2
UBR1Q8IWV7 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC35.03■■■■□ 3.2
UBR1Q8IWV7 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC35.03■■■■□ 3.2
UBR1Q8IWV7 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC35.03■■■■□ 3.2
UBR1Q8IWV7 KRT18P10-201ENST00000388836 1287 ntBASIC35.03■■■■□ 3.2
UBR1Q8IWV7 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC35.02■■■■□ 3.2
UBR1Q8IWV7 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC35.02■■■■□ 3.2
UBR1Q8IWV7 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC35.01■■■■□ 3.2
UBR1Q8IWV7 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC35.01■■■■□ 3.2
UBR1Q8IWV7 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC35.01■■■■□ 3.19
UBR1Q8IWV7 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC35.01■■■■□ 3.19
UBR1Q8IWV7 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC35■■■■□ 3.19
UBR1Q8IWV7 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC35■■■■□ 3.19
UBR1Q8IWV7 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC35■■■■□ 3.19
UBR1Q8IWV7 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC35■■■■□ 3.19
UBR1Q8IWV7 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC34.99■■■■□ 3.19
UBR1Q8IWV7 SENP5-202ENST00000419026 973 ntTSL 3 BASIC34.99■■■■□ 3.19
UBR1Q8IWV7 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC34.99■■■■□ 3.19
UBR1Q8IWV7 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC34.98■■■■□ 3.19
UBR1Q8IWV7 AL512631.2-201ENST00000604634 923 ntBASIC34.98■■■■□ 3.19
UBR1Q8IWV7 MIR4466-201ENST00000606121 54 ntBASIC34.98■■■■□ 3.19
UBR1Q8IWV7 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC34.98■■■■□ 3.19
UBR1Q8IWV7 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC34.98■■■■□ 3.19
UBR1Q8IWV7 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC34.98■■■■□ 3.19
UBR1Q8IWV7 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC34.97■■■■□ 3.19
UBR1Q8IWV7 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC34.97■■■■□ 3.19
UBR1Q8IWV7 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC34.97■■■■□ 3.19
UBR1Q8IWV7 QDPR-206ENST00000508623 601 ntTSL 3 BASIC34.97■■■■□ 3.19
UBR1Q8IWV7 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC34.96■■■■□ 3.19
UBR1Q8IWV7 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC34.95■■■■□ 3.19
UBR1Q8IWV7 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC34.95■■■■□ 3.19
UBR1Q8IWV7 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC34.95■■■■□ 3.19
UBR1Q8IWV7 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC34.95■■■■□ 3.19
UBR1Q8IWV7 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC34.95■■■■□ 3.19
UBR1Q8IWV7 MIR3621-201ENST00000580529 85 ntBASIC34.94■■■■□ 3.18
UBR1Q8IWV7 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC34.94■■■■□ 3.18
UBR1Q8IWV7 PROC-203ENST00000409048 1586 ntTSL 5 BASIC34.93■■■■□ 3.18
UBR1Q8IWV7 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC34.92■■■■□ 3.18
UBR1Q8IWV7 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC34.92■■■■□ 3.18
UBR1Q8IWV7 MIR6724-1-201ENST00000616420 92 ntBASIC34.92■■■■□ 3.18
UBR1Q8IWV7 MIR6724-2-201ENST00000616483 92 ntBASIC34.92■■■■□ 3.18
UBR1Q8IWV7 MIR6724-4-201ENST00000617390 92 ntBASIC34.92■■■■□ 3.18
UBR1Q8IWV7 MIR6724-3-201ENST00000622482 92 ntBASIC34.92■■■■□ 3.18
UBR1Q8IWV7 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC34.92■■■■□ 3.18
UBR1Q8IWV7 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC34.92■■■■□ 3.18
UBR1Q8IWV7 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC34.92■■■■□ 3.18
UBR1Q8IWV7 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC34.92■■■■□ 3.18
UBR1Q8IWV7 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC34.91■■■■□ 3.18
UBR1Q8IWV7 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC34.9■■■■□ 3.18
UBR1Q8IWV7 RARRES2P6-201ENST00000567333 442 ntBASIC34.9■■■■□ 3.18
UBR1Q8IWV7 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC34.9■■■■□ 3.18
UBR1Q8IWV7 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC34.9■■■■□ 3.18
UBR1Q8IWV7 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC34.9■■■■□ 3.18
UBR1Q8IWV7 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC34.9■■■■□ 3.18
UBR1Q8IWV7 AC096631.2-201ENST00000436136 790 ntBASIC34.89■■■■□ 3.18
UBR1Q8IWV7 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC34.89■■■■□ 3.18
UBR1Q8IWV7 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC34.88■■■■□ 3.17
UBR1Q8IWV7 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC34.88■■■■□ 3.17
UBR1Q8IWV7 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC34.88■■■■□ 3.17
UBR1Q8IWV7 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC34.88■■■■□ 3.17
UBR1Q8IWV7 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC34.87■■■■□ 3.17
UBR1Q8IWV7 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC34.87■■■■□ 3.17
UBR1Q8IWV7 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC34.87■■■■□ 3.17
UBR1Q8IWV7 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC34.87■■■■□ 3.17
UBR1Q8IWV7 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC34.87■■■■□ 3.17
UBR1Q8IWV7 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC34.86■■■■□ 3.17
UBR1Q8IWV7 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC34.86■■■■□ 3.17
UBR1Q8IWV7 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC34.86■■■■□ 3.17
UBR1Q8IWV7 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC34.86■■■■□ 3.17
UBR1Q8IWV7 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC34.86■■■■□ 3.17
UBR1Q8IWV7 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC34.85■■■■□ 3.17
UBR1Q8IWV7 AL449106.1-201ENST00000608517 1980 ntBASIC34.85■■■■□ 3.17
UBR1Q8IWV7 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC34.85■■■■□ 3.17
UBR1Q8IWV7 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC34.85■■■■□ 3.17
UBR1Q8IWV7 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC34.85■■■■□ 3.17
UBR1Q8IWV7 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC34.85■■■■□ 3.17
UBR1Q8IWV7 MTDHP2-201ENST00000601468 714 ntBASIC34.85■■■■□ 3.17
UBR1Q8IWV7 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC34.85■■■■□ 3.17
UBR1Q8IWV7 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC34.84■■■■□ 3.17
UBR1Q8IWV7 LSM4-201ENST00000252816 986 ntTSL 2 BASIC34.84■■■■□ 3.17
UBR1Q8IWV7 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC34.84■■■■□ 3.17
UBR1Q8IWV7 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC34.84■■■■□ 3.17
UBR1Q8IWV7 AC010997.5-201ENST00000609182 354 ntBASIC34.84■■■■□ 3.17
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms